Devising sophisticated computational comparative genomic analysis strategies for animal and plant genomes. Given the significance of comparative genomic analysis, this research proposal brings together Australian scientists with a track record in comparative genomic analysis, bioinformatics, molecular biology and statistics to work on consolidating a computational framework for comparative genomic analysis and investigating transcriptome data by capitalising on international collaborations and i ....Devising sophisticated computational comparative genomic analysis strategies for animal and plant genomes. Given the significance of comparative genomic analysis, this research proposal brings together Australian scientists with a track record in comparative genomic analysis, bioinformatics, molecular biology and statistics to work on consolidating a computational framework for comparative genomic analysis and investigating transcriptome data by capitalising on international collaborations and involvement. The outcomes of this research will be of benefit to the national community through technology transfer (such as the identification of novel and functional genomic non-coding sequences), training (in bioinformatics related activities) and national coordination (of bioinformatics activities).Read moreRead less
Learning and Teaching Genetics in a Biotechnological World: A Multidimensional Investigation of Conceptual Change. The aim of this research is to investigate students' and experts' understandings of fundamental concepts of genetics. The aim also is to investigate teaching strategies that will develop appropriate concepts for living in a biotechnological world. This is significant because genetics is critical content knowledge for general scientific literacy. This is the first research to investi ....Learning and Teaching Genetics in a Biotechnological World: A Multidimensional Investigation of Conceptual Change. The aim of this research is to investigate students' and experts' understandings of fundamental concepts of genetics. The aim also is to investigate teaching strategies that will develop appropriate concepts for living in a biotechnological world. This is significant because genetics is critical content knowledge for general scientific literacy. This is the first research to investigate how children's theories of genetics develop and it brings together two successful theoretical approaches. The outcomes of this qualitative research will be detailed descriptions and interpretations of what children already know about genetics, what they should know, and effective teaching strategies for conceptual change.Read moreRead less
Discovery of the molecular mode of action of karrikins in plants. Karrikins are a newly-discovered family of naturally-occurring plant growth regulators that stimulate seed germination and seedling vigour. They were discovered in smoke and while they are centrally important in fire ecology they have far wider significance since species from non-fire-prone regions also respond to karrikins. Our research will discover how karrikins work at the molecular level in plant cells. Our discoveries will b ....Discovery of the molecular mode of action of karrikins in plants. Karrikins are a newly-discovered family of naturally-occurring plant growth regulators that stimulate seed germination and seedling vigour. They were discovered in smoke and while they are centrally important in fire ecology they have far wider significance since species from non-fire-prone regions also respond to karrikins. Our research will discover how karrikins work at the molecular level in plant cells. Our discoveries will be applied to improve growth of crop plants, to stimulate germination of weeds so that they can be eradicated, and in restoration ecology to revegetate degraded land such as minesites. Australia's world-leading position in this new important research area will be enhanced.Read moreRead less
Metabolomic and genetic approaches to the discovery of genes that direct carbon partitioning in plants. Plants make starch, sucrose, cell walls (fibre), oil, organic acids, vitamins and other products of great economic and social importance. The partitioning of carbon resources into such products determines crop productivity and quality. This partitioning is strongly influenced by nutrients, water and salinity. The powerful genomics resources of Arabidopsis including the new discipline of metabo ....Metabolomic and genetic approaches to the discovery of genes that direct carbon partitioning in plants. Plants make starch, sucrose, cell walls (fibre), oil, organic acids, vitamins and other products of great economic and social importance. The partitioning of carbon resources into such products determines crop productivity and quality. This partitioning is strongly influenced by nutrients, water and salinity. The powerful genomics resources of Arabidopsis including the new discipline of metabolomics, will be deployed to understand the regulation of carbon partitioning in leaves and to discover genes that direct partitioning. National research capability will be enhanced and new resources will be generated to breed crops with improved yield potential and product quality under varied environmental conditions.Read moreRead less
Discovery of the physiological and molecular modes of action of butenolides in promoting seed germination and vigour in plants. The Australian discovery of butenolides opens up a new scientific frontier and new opportunities for land management, plant conservation and agriculture. Butenolides will be used to promote seed germination and plant growth in land reclamation, in conservation of species, to break dormancy in weeds so that they can be eradicated, and to promote germination and vigour in ....Discovery of the physiological and molecular modes of action of butenolides in promoting seed germination and vigour in plants. The Australian discovery of butenolides opens up a new scientific frontier and new opportunities for land management, plant conservation and agriculture. Butenolides will be used to promote seed germination and plant growth in land reclamation, in conservation of species, to break dormancy in weeds so that they can be eradicated, and to promote germination and vigour in crops. Realising the full potential of butenolides demands that we understand how they work so that creative approaches can be developed that may not even require use of the chemical. Crucially by achieving these aims ahead of international competitors we can ensure that Australia gains maximum benefit.Read moreRead less
Novel Bioinformatics approaches for genetics and data linkage. The research project will involve creation of novel data and communications formats to fulfil the vital task of integrating the vast heterogeneous biological resources available. We will apply this new infrastructure to a large data linkage project. In parallel, we will undertake methodological research in informatics to design high throughput research methods and tools to analyse and visualise genetic data. These will be applied to ....Novel Bioinformatics approaches for genetics and data linkage. The research project will involve creation of novel data and communications formats to fulfil the vital task of integrating the vast heterogeneous biological resources available. We will apply this new infrastructure to a large data linkage project. In parallel, we will undertake methodological research in informatics to design high throughput research methods and tools to analyse and visualise genetic data. These will be applied to linkage disequilibrium mapping and haplotyping in human, animal and plant diseases. Improving informatics integration and designing novel methods and implementations of algorithms will be beneficial to local and international researchers in a range of fields.Read moreRead less
Fast tracking pea weevil resistance into field pea cultivars through interspecific hybridisation. Field pea is a high value export product of Australia and increased adoption will lead to greater sustainability of agriculture, improved farm income and value adding opportunities (eg. food industry) in regional Australia. Novel breeding tools used within this project will accelerate the development of pea weevil resistant field peas that are less dependent on the application of pesticides than cur ....Fast tracking pea weevil resistance into field pea cultivars through interspecific hybridisation. Field pea is a high value export product of Australia and increased adoption will lead to greater sustainability of agriculture, improved farm income and value adding opportunities (eg. food industry) in regional Australia. Novel breeding tools used within this project will accelerate the development of pea weevil resistant field peas that are less dependent on the application of pesticides than current varieties. Their availability will encourage further uptake of field pea into Australian cropping systems, contributing to environmentally sustainable farming systems by improving soil nitrogen levels and reducing the environmental effect of pesticides.Read moreRead less
KConFab - The Kathleen Cuningham Foundation Consortium For Research Into Familial Breast Cancer
Funder
National Health and Medical Research Council
Funding Amount
$2,176,975.00
Summary
Breast cancer is the most common malignant disease of women. In families with an inherited form of breast cancer, nearly half the women in every generation can develop the disease. The aim of this Australasian-wide study is to complete collection of clinical, epidemiological and genetic data on 1,600 of these severely-affected families. The national resource is, and will continue to be, of great value for researchers who want to identify and characterize the genetic and life style factors that a ....Breast cancer is the most common malignant disease of women. In families with an inherited form of breast cancer, nearly half the women in every generation can develop the disease. The aim of this Australasian-wide study is to complete collection of clinical, epidemiological and genetic data on 1,600 of these severely-affected families. The national resource is, and will continue to be, of great value for researchers who want to identify and characterize the genetic and life style factors that affect onset and progression of the disease.Read moreRead less
A Genome-wide Association Study In 2000 Glaucoma Cases With Matched Controls Using Equimoloar DNA Pools
Funder
National Health and Medical Research Council
Funding Amount
$610,267.00
Summary
Glaucoma is a common cause of loss of vision worldwide but we are unable to predict which people are at high risk of blindness. We aim to discover the genetic risk factors for glaucoma. We will use cutting edge genetic technology to assess the whole genome in thousands of patients with glaucoma. We hope to identify important new glaucoma genes, which could lead to the development of diagnostic tests and treatments which will provide the most cost-efficient ways to prevent glaucoma blindness.