Molecular insights into bacterial metal ion homeostasis and toxicity. This project aims to measure bacterial cellular metal concentrations, elucidate mechanisms cells use to adapt to changing extracellular metal concentrations, and reveal the molecular targets of metal toxicity. Metal ions are essential to all forms of life, and half of all proteins use metal ions for cellular chemical processes. However, how cells precisely balance sufficient metal ions for essential cellular chemistry without ....Molecular insights into bacterial metal ion homeostasis and toxicity. This project aims to measure bacterial cellular metal concentrations, elucidate mechanisms cells use to adapt to changing extracellular metal concentrations, and reveal the molecular targets of metal toxicity. Metal ions are essential to all forms of life, and half of all proteins use metal ions for cellular chemical processes. However, how cells precisely balance sufficient metal ions for essential cellular chemistry without accumulating a toxic excess (metal homeostasis) is poorly understood. Discovering the roles of metal ions in bacterial cells will be key to defining the chemical biology of living systems and will provide information essential to understanding how microbes adapt to changing environments.Read moreRead less
Development and implementation of biodiversity information for sustainable management of South Australian groundwater. Clean potable water is one of the most important resources for human health and a successful economy. Increasingly, subterranean aquifers are used for storage and recovery of water. These aquifers contain dynamic ecosystems, but little is known about species composition or about the importance of the presence of various species for water quality. We will use the latest laborator ....Development and implementation of biodiversity information for sustainable management of South Australian groundwater. Clean potable water is one of the most important resources for human health and a successful economy. Increasingly, subterranean aquifers are used for storage and recovery of water. These aquifers contain dynamic ecosystems, but little is known about species composition or about the importance of the presence of various species for water quality. We will use the latest laboratory techniques and DNA identification methods to provide a template for determining ground water diversity and food web dynamics throughout Australia. This project will lead to a better understanding of how to manage ground water in a sustainable manner.Read moreRead less
Bacterial polycyclic aromatic hydrocarbon transport and degradation. This project aims to investigate the molecular processes underpinning the degradation of polycyclic aromatic hydrocarbons (PAHs) by bacteria. PAHs are persistent environmental contaminants linked to several human diseases, including cancer. Bacteria capable of degrading PAHs could be used to naturally and effectively reduce environmental PAH loads to below safe levels. The project will apply techniques in functional genomics an ....Bacterial polycyclic aromatic hydrocarbon transport and degradation. This project aims to investigate the molecular processes underpinning the degradation of polycyclic aromatic hydrocarbons (PAHs) by bacteria. PAHs are persistent environmental contaminants linked to several human diseases, including cancer. Bacteria capable of degrading PAHs could be used to naturally and effectively reduce environmental PAH loads to below safe levels. The project will apply techniques in functional genomics and biochemistry to help define the ways that PAHs are taken up from the environment by bacteria, their fate within bacterial cells, and the ways that bacteria overcome the inherent toxicity of PAHs. The knowledge generated is expected to enhance our capacity to rationally deploy bacteria for PAH degradation.Read moreRead less
Novel link between bacterial sugar metabolism and cell-to-cell signalling. This project aims to understand the role and function of the bacterial communication system that enables bacteria to form complex communities and alter phenotypic traits, essential for survival in their environment. Bacteria survive in their environmental niches by developing complex multicellular communities. Cell to cell communication, termed quorum sensing (QS), is critical for this process and is linked to their capac ....Novel link between bacterial sugar metabolism and cell-to-cell signalling. This project aims to understand the role and function of the bacterial communication system that enables bacteria to form complex communities and alter phenotypic traits, essential for survival in their environment. Bacteria survive in their environmental niches by developing complex multicellular communities. Cell to cell communication, termed quorum sensing (QS), is critical for this process and is linked to their capacity to detect and secrete small signalling molecules, autoinducers. This project will provide a new paradigm in bacterial adaptation through comprehensive characterisation of the Autoinducer-2 QS system. This knowledge will provide future opportunities for intervention in microbial infestation with broad potential benefits.Read moreRead less
Role of plant host factors in the replication and pathogenesis of Tomato leaf curl virus (TLCV). Geminivirus infection is an emerging problem in the Australian tomato growing industry which is currently worth ca.A$200m annually. Knowledge gained from this research will have direct benefit in safeguarding this industry by providing an insight into geminivirus replication and identifying molecular targets for virus control. More generally, the technology developed through this study will contribu ....Role of plant host factors in the replication and pathogenesis of Tomato leaf curl virus (TLCV). Geminivirus infection is an emerging problem in the Australian tomato growing industry which is currently worth ca.A$200m annually. Knowledge gained from this research will have direct benefit in safeguarding this industry by providing an insight into geminivirus replication and identifying molecular targets for virus control. More generally, the technology developed through this study will contribute to our basic understanding of virus replication in plants with a view to controlling virus diseases by direct molecular intervention with specifically engineered tools. We foresee potential industrial applications. Read moreRead less
Quantitative Metagenomics. This project aims to revolutionize our view of the microbial world once more by transforming microbiome studies from relative counts of organisms to actual numbers of microbes. This project expects to impact all the microbiome studies that are being performed worldwide by unveiling the actual numbers of microbes. Expected outcomes of this project include new techniques to enumerate the number of bacteria in different environments and new approaches to measure gene expr ....Quantitative Metagenomics. This project aims to revolutionize our view of the microbial world once more by transforming microbiome studies from relative counts of organisms to actual numbers of microbes. This project expects to impact all the microbiome studies that are being performed worldwide by unveiling the actual numbers of microbes. Expected outcomes of this project include new techniques to enumerate the number of bacteria in different environments and new approaches to measure gene expression within individual bacteria in any environment that will be demonstrated with complex microbial communities. This should provide significant benefits because microbes affect every aspect of our lives and those effects are driven by how many microbes are present.Read moreRead less
Development of a vaccine to protect koalas against koala retrovirus (KoRV). This project aims to develop a vaccine against koala retrovirus (KoRV) to arrest the increasing loss of animals due to this infection. Along with Chlamydia, KoRV threatens the long-term survival of the koala. KoRV infects over 95 per cent of Australia’s koalas and has been strongly linked to lymphoma and leukemia. Although quarantine and antiretroviral drug treatment are possible control measures, they are impractical in ....Development of a vaccine to protect koalas against koala retrovirus (KoRV). This project aims to develop a vaccine against koala retrovirus (KoRV) to arrest the increasing loss of animals due to this infection. Along with Chlamydia, KoRV threatens the long-term survival of the koala. KoRV infects over 95 per cent of Australia’s koalas and has been strongly linked to lymphoma and leukemia. Although quarantine and antiretroviral drug treatment are possible control measures, they are impractical in the wild, leaving vaccination as the only realistic option. This is valuable for both wild and captive koalas; zoos report high animal losses due to KoRV-associated lymphoma. The main outcome will be a KoRV vaccine which can be combined with a Chlamydia vaccine which is being developed in parallel.Read moreRead less
The Role of the Single-Cell Environment in Microbial Invasion. This project aims to use a single-cell approach to develop a quantitative analysis of single-cell interactions to advance our understanding of complex bacterial behaviour fundamental to ecology, industry, technology and disease. Bacteria are ubiquitous on Earth and play key roles in nutrient cycles, biogeochemistry, pathogenesis, symbiosis and bioremediation among other processes. They exhibit complex behaviour and continuously invad ....The Role of the Single-Cell Environment in Microbial Invasion. This project aims to use a single-cell approach to develop a quantitative analysis of single-cell interactions to advance our understanding of complex bacterial behaviour fundamental to ecology, industry, technology and disease. Bacteria are ubiquitous on Earth and play key roles in nutrient cycles, biogeochemistry, pathogenesis, symbiosis and bioremediation among other processes. They exhibit complex behaviour and continuously invade animals, plants and new habitats. These behaviours are poorly understood in natural communities.Read moreRead less
Detection and viability of waterborne pathogens using a gut-on-chip. This project aims to resolve a significant problem for water utilities. Microbial pathogens Cryptosporidium, norovirus and adenovirus are the main public health concern for drinking water in developed nations. Water monitoring is limited by the lack of fast, reliable detection methods and viability assays for these pathogens. This project will use a novel gut-on-a-chip to develop for the first time rapid infectivity assays for ....Detection and viability of waterborne pathogens using a gut-on-chip. This project aims to resolve a significant problem for water utilities. Microbial pathogens Cryptosporidium, norovirus and adenovirus are the main public health concern for drinking water in developed nations. Water monitoring is limited by the lack of fast, reliable detection methods and viability assays for these pathogens. This project will use a novel gut-on-a-chip to develop for the first time rapid infectivity assays for Cryptosporidium, norovirus and adenovirus. Significant benefits include improved diagnostics and water disinfection assays, improved water treatment and reduced costs with global impact.Read moreRead less
Bacterial mechanisms of gold mobilisation and precipitation with applications to mineral processing and exploration. The development of a comprehensive model for the biogeochemical behaviour of gold in the environment will aid mineral explorers to interpret existing exploration data and to develop better exploration strategies. Moreover, this project aims to develop the basis for a new geomicrobiological gold exploration method by identifying organisms and microbial gene sequences that could be ....Bacterial mechanisms of gold mobilisation and precipitation with applications to mineral processing and exploration. The development of a comprehensive model for the biogeochemical behaviour of gold in the environment will aid mineral explorers to interpret existing exploration data and to develop better exploration strategies. Moreover, this project aims to develop the basis for a new geomicrobiological gold exploration method by identifying organisms and microbial gene sequences that could be used as biomarkers for mineralisation. This research will also provide the fundamental information required to copy nature and engineer new cost-efficient and environmentally friendly technologies for gold processing using microorganisms that occur naturally in Australian soils. Read moreRead less