Genomic signatures of adaptive diversification in woodland Eucalyptus. This project aims to map the sources of adaptive alleles underlying diversification is to reveal insights into the mechanisms of speciation. The source of the raw material for evolution can have significant impacts on the speed with which populations can adapt. An emerging pattern in speciation research is the importance of ancient alleles and introgressed genes, which differ in the genomic signatures left by selection. Eucal ....Genomic signatures of adaptive diversification in woodland Eucalyptus. This project aims to map the sources of adaptive alleles underlying diversification is to reveal insights into the mechanisms of speciation. The source of the raw material for evolution can have significant impacts on the speed with which populations can adapt. An emerging pattern in speciation research is the importance of ancient alleles and introgressed genes, which differ in the genomic signatures left by selection. Eucalyptus offers a unique opportunity to explore these modes of evolution using the latest genomic tools. Improving our understanding of adaptation and genetic variation in woodland eucalypts is expected to make a significant contribution to their conservation, management and restoration.Read moreRead less
ARC Centre of Excellence for Plant Success in Nature and Agriculture. The ARC CoE for Plant Success in Nature and Agriculture will discover the adaptive strategies underpinning productivity and resilience in diverse plants and deepen knowledge of the genetic and physiological networks driving key traits. Using novel quantitative and computational approaches, the Centre will link gene networks with traits across biological levels, giving breeders an unparalleled predictive capacity. The Centre wi ....ARC Centre of Excellence for Plant Success in Nature and Agriculture. The ARC CoE for Plant Success in Nature and Agriculture will discover the adaptive strategies underpinning productivity and resilience in diverse plants and deepen knowledge of the genetic and physiological networks driving key traits. Using novel quantitative and computational approaches, the Centre will link gene networks with traits across biological levels, giving breeders an unparalleled predictive capacity. The Centre will accelerate technologies to transfer successful networks into crops and build legal frameworks to secure this knowledge. With a uniquely multidisciplinary team, the Centre will deliver new strategies to address the problems of food security and climate change, establishing Australia as a global leader in these areas.Read moreRead less
Using genetics to recover Australia's lost history. This project aims to use historic hair samples collected by anthropological expeditions in the early 20th Century to generate the first genetic map of Aboriginal Australia – in order to reconstruct Australia’s pre-European genetic and cultural past. The map and the detailed contextual and genealogical information from museum archives will assist Aboriginal communities and individuals to reconstruct their personal and family history and trace an ....Using genetics to recover Australia's lost history. This project aims to use historic hair samples collected by anthropological expeditions in the early 20th Century to generate the first genetic map of Aboriginal Australia – in order to reconstruct Australia’s pre-European genetic and cultural past. The map and the detailed contextual and genealogical information from museum archives will assist Aboriginal communities and individuals to reconstruct their personal and family history and trace ancestry and augment oral or written records. The combination of cutting-edge science, detailed archival research, and a comprehensive family outreach and reporting program will be a step change in assisting Australia’s reconciliation process, the Stolen Generation, and repatriation of Indigenous remains.Read moreRead less
Collaborative science for monitoring of Northern Territory marine megafauna. The project’s aim is to map population connectivity and critical habitat for coastal marine megafauna in remote northern Australian waters, providing a more informed scientific base for biodiversity monitoring and management. The project will employ cutting edge methods in genetics and movement ecology and unite Indigenous rangers with marine national park managers and scientists. Expected outcomes include enhanced capa ....Collaborative science for monitoring of Northern Territory marine megafauna. The project’s aim is to map population connectivity and critical habitat for coastal marine megafauna in remote northern Australian waters, providing a more informed scientific base for biodiversity monitoring and management. The project will employ cutting edge methods in genetics and movement ecology and unite Indigenous rangers with marine national park managers and scientists. Expected outcomes include enhanced capacity for monitoring and conservation planning and new partnerships that will improve research capacity in remote environments. Benefits include environmental management led by Indigenous Traditional Owners, sea rangers and marine park managers, and conservation benefits to coastal dolphin and sea turtle species.Read moreRead less
E. coli as an indicator of faecal contamination in the Australian context. The goal of this research is to improve our ability to use Escherichia coli as an indicator of water quality by determining the extent to which non-faecal sources of E. coli contribute to coliform counts and to develop a method to differentiate non-faecal E. coli from those that are faecal derived.
Do chromosomal rearrangements drive genomic evolution and speciation? This project aims to gain an understanding of the processes driving speciation using the internationally recognised and uniquely Australian rock-wallaby model system, where speciation appears to be caught in the act. Speciation is a fundamental evolutionary process, yet one that is not well understood. The project plans to use recent advances in marsupial genomics, bioinformatics, cytogenetics and epigenetics to determine the ....Do chromosomal rearrangements drive genomic evolution and speciation? This project aims to gain an understanding of the processes driving speciation using the internationally recognised and uniquely Australian rock-wallaby model system, where speciation appears to be caught in the act. Speciation is a fundamental evolutionary process, yet one that is not well understood. The project plans to use recent advances in marsupial genomics, bioinformatics, cytogenetics and epigenetics to determine the role that chromosome rearrangements play in the speciation process. This may provide critical knowledge for understanding the process of speciation and for future decisions regarding the effective management of biodiversity.Read moreRead less
A stitch in time: evidence-based strategy to keep platypus from extinction. This project aims to assess the status of the iconic platypus, identified as ‘near-threatened’ in 2014. The project’s multidisciplinary approach plans to compare regulated and unregulated rivers to investigate metapopulation structure (via physical and genetic tagging), current condition and future adaptability of the species, as well as other threats and habitat quality. The project also links vulnerability of platypus ....A stitch in time: evidence-based strategy to keep platypus from extinction. This project aims to assess the status of the iconic platypus, identified as ‘near-threatened’ in 2014. The project’s multidisciplinary approach plans to compare regulated and unregulated rivers to investigate metapopulation structure (via physical and genetic tagging), current condition and future adaptability of the species, as well as other threats and habitat quality. The project also links vulnerability of platypus populations to conservation actions that reduce extinction risk, through rigorous decision analyses. It is anticipated that the project will deliver implementable conservation actions at relevant scales.Read moreRead less
Genomes on islands: Improving management of Australia's threatened mammals. This project aims to improve the management of endangered mammals by combining data on genomic and morphological variation with results from conservation translocations. Using new genomics methods, the project will measure the effects of small population size on genetic diversity and mutation load, in extinct as well as remnant and translocated populations. The project will monitor seven intensively managed marsupial spe ....Genomes on islands: Improving management of Australia's threatened mammals. This project aims to improve the management of endangered mammals by combining data on genomic and morphological variation with results from conservation translocations. Using new genomics methods, the project will measure the effects of small population size on genetic diversity and mutation load, in extinct as well as remnant and translocated populations. The project will monitor seven intensively managed marsupial species to better understand how to mix populations for fauna restoration projects. This project should improve methods to promote species recovery in Australia and globally.Read moreRead less
Does dynamic ecological change cause rapid evolution? This project aims to increase understanding of how Australia’s native biota responds to rapid environmental changes. Abrupt environmental change has the potential to drive rapid evolution, which may facilitate species persistence in the face of novel challenges. This project will use long-term genomic data to quantify rates of evolutionary change in species living in arid environments, whose populations fluctuate markedly in response to rainf ....Does dynamic ecological change cause rapid evolution? This project aims to increase understanding of how Australia’s native biota responds to rapid environmental changes. Abrupt environmental change has the potential to drive rapid evolution, which may facilitate species persistence in the face of novel challenges. This project will use long-term genomic data to quantify rates of evolutionary change in species living in arid environments, whose populations fluctuate markedly in response to rainfall variation. By measuring the pace of genomic change in these species, and the evolutionary processes driving that change, this project will reveal species’ evolutionary responses to major environmental fluctuations.Read moreRead less
Optimising plant populations for ecological restoration and resilience. When choosing individual plants for restoration populations, there is potentially a trade-off between maximising genetic diversity (‘adaptability’) and selection for desirable properties (‘adaptation’). This project aims to develop pioneering methods to quantify this trade-off, and facilitate the design of optimised populations, with a focus on two Australian rainforest trees that are being impacted by myrtle rust infection: ....Optimising plant populations for ecological restoration and resilience. When choosing individual plants for restoration populations, there is potentially a trade-off between maximising genetic diversity (‘adaptability’) and selection for desirable properties (‘adaptation’). This project aims to develop pioneering methods to quantify this trade-off, and facilitate the design of optimised populations, with a focus on two Australian rainforest trees that are being impacted by myrtle rust infection: Rhodamnia argentea and Rhodamnia rubescens. By studying the genetic variation in each species, and how this relates to myrtle rust resistance and climate, this project aims to design populations that are genetically diverse, maximally resistant to myrtle rust, and adapted to future climate.Read moreRead less