Development of cloning technology for the Australian Pig Industry. Cloning has the potential to be the most efficient of the reproductive technologies developed for increasing genetic improvement in livestock. Currently up to 5% of cloned embryos develop to term in the pig. This is higher than that reported for cattle and sheep. Moreover the use of this technology in the pig does not appear not to result in the same sorts of problems and losses seen around the time of birth in these species ....Development of cloning technology for the Australian Pig Industry. Cloning has the potential to be the most efficient of the reproductive technologies developed for increasing genetic improvement in livestock. Currently up to 5% of cloned embryos develop to term in the pig. This is higher than that reported for cattle and sheep. Moreover the use of this technology in the pig does not appear not to result in the same sorts of problems and losses seen around the time of birth in these species i.e. the majority of cloned pigs appear normal and are healthy at birth. However before cloning can be used commercially, current efficiencies need to be increased approx two fold for this to be economically viable. The aim of the present study is to improve the efficiency of our current cloning protocol and develop associated technologies such as embryo freezing to facilitate commercialisation. This will ensure that the Australian Pig Industry remains competitive at a pivotal time in its development.Read moreRead less
Industrial Transformation Training Centres - Grant ID: IC230100016
Funder
Australian Research Council
Funding Amount
$5,000,000.00
Summary
ARC Training Centre in Predictive Breeding for Agricultural Futures. This Centre aims to develop the advanced capacity needed to secure Australia’s food and fibre production and export value into the future. Leveraging immense industry support, the Centre expects to develop and integrate cutting-edge plant and animal breeding technologies and deliver world-class training that addresses critical demand for highly skilled industry leaders. Expected outcomes include a future-ready predictive breedi ....ARC Training Centre in Predictive Breeding for Agricultural Futures. This Centre aims to develop the advanced capacity needed to secure Australia’s food and fibre production and export value into the future. Leveraging immense industry support, the Centre expects to develop and integrate cutting-edge plant and animal breeding technologies and deliver world-class training that addresses critical demand for highly skilled industry leaders. Expected outcomes include a future-ready predictive breeding industry able to transform data into optimised decisions, and the human capacity to drive it. This should provide significant benefits to enhance the sustainability and profitability of all major Australian agriculture sectors, including livestock, grains, horticulture, cotton, wine, dairy, forestry and fisheries.Read moreRead less
Optimising the Strategy for Breeding Micronutrient-Dense Staple Foods that Improve Human health and Nutrition. The project is part of a new paradigm for agriculture in which staple crops are bred with greater micronutrient density to improve human health. It generates strategic basic information on how nutrients interact in the body of animal models in absorption, transport and utilisation that will allow plant breeders to optimise the breeding strategy for maximum outcomes in health and minimum ....Optimising the Strategy for Breeding Micronutrient-Dense Staple Foods that Improve Human health and Nutrition. The project is part of a new paradigm for agriculture in which staple crops are bred with greater micronutrient density to improve human health. It generates strategic basic information on how nutrients interact in the body of animal models in absorption, transport and utilisation that will allow plant breeders to optimise the breeding strategy for maximum outcomes in health and minimum breeding cost. Animals deficient in the nutrients of most concern (iron, zinc, vitamin A - and inulin) will be fed new varieties with enhanced levels of these factors, and from the responses, a superior strategy will be developed.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE120100390
Funder
Australian Research Council
Funding Amount
$375,000.00
Summary
Characterisation of collagenous lectins and their roles in ovine infectious diseases. Specific proteins involved in immunity against infections will be studied in sheep to enhance their immune response against specific infections, such as ovine Johne's disease and footrot. This may lead to selective breeding of sheep that are more resistant to disease, minimising production losses and use of medications.
Estimating genotype-environment interaction using genomic information. This project aims to develop statistical methods that can explore genotype–environment interaction at the genomic level using genome-wide single nucleotide polymorphisms or sequence data. It plans to estimate how the effects of genetic variants change with changing environmental conditions and how overall genetic variance changes due to changing effects in specific gene regions. It plans to deliver statistical models and meth ....Estimating genotype-environment interaction using genomic information. This project aims to develop statistical methods that can explore genotype–environment interaction at the genomic level using genome-wide single nucleotide polymorphisms or sequence data. It plans to estimate how the effects of genetic variants change with changing environmental conditions and how overall genetic variance changes due to changing effects in specific gene regions. It plans to deliver statistical models and methods and an efficient algorithm implemented in software, which would broadly benefit the field of complex trait genetics. Methods to estimate genotype–environment interaction effects at the genomic level would help elucidate complex biological systems, including human genetic response to changing environmental factors and the potential adaptation of animals to changing environmental conditions.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0561115
Funder
Australian Research Council
Funding Amount
$474,500.00
Summary
Adelaide Core Live Organism Imaging Facility. Live organism imaging represents a powerful and essential tool in many aspects of modern biology. This application is for the purchase of two major items of equipment: a Xenogen IVIS Imaging System 200 and a Skyscan 1076_in vivo micro-CT scanner. As there are presently no machines within Adelaide capable of real-time live animal and plant imaging, scientific progress in a number of projects is significantly restricted. The acquisition of a state-of ....Adelaide Core Live Organism Imaging Facility. Live organism imaging represents a powerful and essential tool in many aspects of modern biology. This application is for the purchase of two major items of equipment: a Xenogen IVIS Imaging System 200 and a Skyscan 1076_in vivo micro-CT scanner. As there are presently no machines within Adelaide capable of real-time live animal and plant imaging, scientific progress in a number of projects is significantly restricted. The acquisition of a state-of-the-art live organism imaging facility in Adelaide would be a major advance for investigators within the Adelaide bioscience community and would increase their research productivity and international competitivenessRead moreRead less
Whole-genome multivariate reaction norm model for complex traits. This project aims to develop a multivariate whole-genome genotype-covariate correlation and interaction model that can be applied to a wide range of existing genome-wide association study (GWAS) datasets. Genotype-covariate correlation and interaction (GCCI) are fundamental in biology but there is no standard approach to disentangle interaction from correlation in the whole-genome analyses. This project will address the key featur ....Whole-genome multivariate reaction norm model for complex traits. This project aims to develop a multivariate whole-genome genotype-covariate correlation and interaction model that can be applied to a wide range of existing genome-wide association study (GWAS) datasets. Genotype-covariate correlation and interaction (GCCI) are fundamental in biology but there is no standard approach to disentangle interaction from correlation in the whole-genome analyses. This project will address the key feature in biology, which relates to dissecting the complex mechanism of association and interaction. The proposed statistical model implemented in a context of a novel design based on multiple GWAS data sets is a paradigm shifting-tool with applications to multiple industries.Read moreRead less
Understanding, controlling and improving the flavour of almond kernels. Almond kernels may be sweet, semi-bitter or bitter, with the first two categories marketed as fresh nuts, while the latter are used in processed products such as marzipan. Semi-bitter kernels have a more interesting flavour than sweet kernels and we require tools to breed for this character. The bitter flavour is imparted by amygdalin via the cyanogenic pathway. This project will characterise the genetic control of sweet, ....Understanding, controlling and improving the flavour of almond kernels. Almond kernels may be sweet, semi-bitter or bitter, with the first two categories marketed as fresh nuts, while the latter are used in processed products such as marzipan. Semi-bitter kernels have a more interesting flavour than sweet kernels and we require tools to breed for this character. The bitter flavour is imparted by amygdalin via the cyanogenic pathway. This project will characterise the genetic control of sweet, semi-bitter and bitter flavour, amygdalin accumulation in developing kernels, and key enzymes in the cyanogenic pathway. Almond populations segregating for these traits will be used and the data will be integrated into the Australian almond meiotic map.Read moreRead less
Microsatellite marker development for almond breeding. Australian almond growers produce 8,000 tonnes of kernel annually, and the long term aim is to develop strong export markets. The industry funds a breeding program at Adelaide University, comprising hybridisation and selection. Through our current ARC SPIRT grant we augment this with a program in molecular techniques. Research is well-advanced in the development of a genetic map for almond based on both molecular and agronomic characters. ....Microsatellite marker development for almond breeding. Australian almond growers produce 8,000 tonnes of kernel annually, and the long term aim is to develop strong export markets. The industry funds a breeding program at Adelaide University, comprising hybridisation and selection. Through our current ARC SPIRT grant we augment this with a program in molecular techniques. Research is well-advanced in the development of a genetic map for almond based on both molecular and agronomic characters. This IREX grant will facilitate integration of our map with the International Prunus mapping program, based at Cabrils, Spain. It will also facilitate augmentation of the map with jointly-developed microsatellite markers.Read moreRead less
Investigation of almond transformation for self-fertility and virus resistance. This project addresses the long-term goal of the Australian almond industry to produce cultivars that are self-fertile and resistant to Prunus necrotic ringspot and prune dwarf viruses. Both self-sterility and virus infection can result in unreliable and often low yields. Research will address the control of gene expression relating to self-sterility and the introduction of virus resistance, via sequencing of self- ....Investigation of almond transformation for self-fertility and virus resistance. This project addresses the long-term goal of the Australian almond industry to produce cultivars that are self-fertile and resistant to Prunus necrotic ringspot and prune dwarf viruses. Both self-sterility and virus infection can result in unreliable and often low yields. Research will address the control of gene expression relating to self-sterility and the introduction of virus resistance, via sequencing of self-fertility and self-sterility genes, construct development and improved regeneration of transformed almond in vitro without the use of antibiotics.Read moreRead less