The Origin and Evolution of the Animal Phyla inferred from Analysis of Multiple-Gene Data. Australia has recently begun an extensive research programme in the genomics of our flora and fauna. The enormous amounts of data that emerge from such research are highly complex, but they hold the key to understanding how biological organisms change over time. Our research will untangle that data to answer fundamental, unanswered questions in modern science: How did the animal groups originate? How are ....The Origin and Evolution of the Animal Phyla inferred from Analysis of Multiple-Gene Data. Australia has recently begun an extensive research programme in the genomics of our flora and fauna. The enormous amounts of data that emerge from such research are highly complex, but they hold the key to understanding how biological organisms change over time. Our research will untangle that data to answer fundamental, unanswered questions in modern science: How did the animal groups originate? How are they related to each other? How is biodiversity changing? The answers to these questions and the new analytical tools we will develop will put Australia firmly on the international "map" of Bioinformatics.Read moreRead less
Structural reorganization of the hymenopteran mitochondrial genome. This study will be the first detailed investigation of the evolution of mt genome reorganization, and as such it will identify the processes that shape the evolution of a molecule widely used to interpret phylogeny. A description of the processes that lead to mt genome reorganization will have a substantial impact on our understanding in two areas of mt biology; (1) the discovery of new molecular phenomena that impact on the or ....Structural reorganization of the hymenopteran mitochondrial genome. This study will be the first detailed investigation of the evolution of mt genome reorganization, and as such it will identify the processes that shape the evolution of a molecule widely used to interpret phylogeny. A description of the processes that lead to mt genome reorganization will have a substantial impact on our understanding in two areas of mt biology; (1) the discovery of new molecular phenomena that impact on the organization and evolution of this genome, and (2) the interpretation of its phylogenetic content. It will establish our research group as a leader in the field of evolutionary genetics. Training of high quality students, with exposure to international researchers, will be a significant component of this program.Read moreRead less
New Molecular Approaches to Comparative Phylogeography. Funds are requested to gather data to test new molecular and analytical approaches in the field of molecular phylogeography. We will generate phylogeographic hypotheses from mitochondrial and microsatellite DNA for six species and evaluate the utility of microsatellite data for the reconstruction of phylogeographic history. We will borrow powerful analytical techniques from the field of evolutionary ecology and use them in a completely nove ....New Molecular Approaches to Comparative Phylogeography. Funds are requested to gather data to test new molecular and analytical approaches in the field of molecular phylogeography. We will generate phylogeographic hypotheses from mitochondrial and microsatellite DNA for six species and evaluate the utility of microsatellite data for the reconstruction of phylogeographic history. We will borrow powerful analytical techniques from the field of evolutionary ecology and use them in a completely novel way to test hypotheses of microsatellite diversity. Our research is inter-disciplinary in that we will bridge the gap between molecular phylogenetics and molecular evolution and in so doing make a major advancement in this emerging field.Read moreRead less
Evolutionary, macroecological and phylogenetic patterns in Australasian freshwater crayfish. This project connects Australian systematists to a worldwide project that involves all of the world's living experts on freshwater crayfish evolution in a coordinated effort to answer some very important evolutionary questions. It involves a group of invertebrate animals that are not only readily recognisable, but which in Australia includes the world's largest and the world's most terrestrial crayfish s ....Evolutionary, macroecological and phylogenetic patterns in Australasian freshwater crayfish. This project connects Australian systematists to a worldwide project that involves all of the world's living experts on freshwater crayfish evolution in a coordinated effort to answer some very important evolutionary questions. It involves a group of invertebrate animals that are not only readily recognisable, but which in Australia includes the world's largest and the world's most terrestrial crayfish species. Information gained from the project will contribute to the management of crayfish biodiversity, identification of threatened species and tools to identify these prominent and important members of Australian freshwater ecosystems.Read moreRead less
Was there an unusual environment with equally remarkable inhabitants in Early Cretaceous southeast Australia? After more than two decades of effort, there is strong evidence that Early Cretaceous southeastern Australia was inhabited by a remarkably diverse polar terrestrial vertebrate fauna adapted to the coldest environment known to have existed anywhere in the late Mesozoic. In this unusual terrestrial habitat for that time, temnospondyl amphibians and allosaurid dinosaurs survived long ....Was there an unusual environment with equally remarkable inhabitants in Early Cretaceous southeast Australia? After more than two decades of effort, there is strong evidence that Early Cretaceous southeastern Australia was inhabited by a remarkably diverse polar terrestrial vertebrate fauna adapted to the coldest environment known to have existed anywhere in the late Mesozoic. In this unusual terrestrial habitat for that time, temnospondyl amphibians and allosaurid dinosaurs survived long after becoming extinct elsewhere. Here, too, are found what may be the oldest known and yet remarkably advanced placental mammals, the group to which we belong. To further corroborate or refute these hypotheses, some of which are highly contentious, is the aim of this project.Read moreRead less
Origins of invertebrate fauna in Australia since the Cretaceous: a molecular approach using bees as a model taxon. Australia's unique biota is vital for ecological, recreational, and economic reasons, and is a major resource that we need to understand and manage. This project is aimed at understanding the genesis of this biota, and will help us anticipate what lies ahead, in terms of the impact of exotic species and climate change. Benefits also include developing world class scientific profiles ....Origins of invertebrate fauna in Australia since the Cretaceous: a molecular approach using bees as a model taxon. Australia's unique biota is vital for ecological, recreational, and economic reasons, and is a major resource that we need to understand and manage. This project is aimed at understanding the genesis of this biota, and will help us anticipate what lies ahead, in terms of the impact of exotic species and climate change. Benefits also include developing world class scientific profiles with consequent flow-on effects, including international collaboration, and enhanced teaching and awareness of native biota. The project will maintain our already strong track record for training a large number of postgraduate and honours students in benchmark evolutionary research techniques. Read moreRead less
Regressive evolution of eyes in subterranean water beetles of arid-zone Australia: A comparative phylogenetic approach. Reduction or total loss of non-functional characters are common evolutionary phenomena, but little is known of the genetic basis of this regressive evolution. This project will use a phylogenetic framework to investigate the forces responsible for evolution of eyelessness in subterranean water beetles, by studying molecular genetic variation in three key eye developmental genes ....Regressive evolution of eyes in subterranean water beetles of arid-zone Australia: A comparative phylogenetic approach. Reduction or total loss of non-functional characters are common evolutionary phenomena, but little is known of the genetic basis of this regressive evolution. This project will use a phylogenetic framework to investigate the forces responsible for evolution of eyelessness in subterranean water beetles, by studying molecular genetic variation in three key eye developmental genes. The water beetles are explicitly suitable to address the questions due to their numerous independently evolved eyeless species and relatively old age of divergence from surface relatives. The research will provide a major new perspective on regressive evolution and the relationship between gene structure and function.Read moreRead less
Australia's oldest jawed fishes: evolution, biostratigraphy and biogeography. The research focusses on a collection of disarticulated remains of placoderms, a group of extinct armoured fishes which dominated Devonian waters (410-354 Mya). The oldest Australian placoderm macroremains so far described are of late Pragian age (400 Mya), and recognized as a highly endemic fauna. An older limestone from New South Wales has yielded new material which includes sclerotic capsules and dermal plates of ....Australia's oldest jawed fishes: evolution, biostratigraphy and biogeography. The research focusses on a collection of disarticulated remains of placoderms, a group of extinct armoured fishes which dominated Devonian waters (410-354 Mya). The oldest Australian placoderm macroremains so far described are of late Pragian age (400 Mya), and recognized as a highly endemic fauna. An older limestone from New South Wales has yielded new material which includes sclerotic capsules and dermal plates of small placoderms. Earliest Devonian (Lochkovian) acanthodians and the new placoderms, unlike the younger taxa, seem closely related to coeval faunas from the circum-Arctic region. The material will help resolve relationships and distribution of these early jawed vertebrates.Read moreRead less
Analysing and modelling molecular rate variation among nuclear and mitochondrial genomes. My research will have important practical benefits for bioinformaticians and evolutionary biologists, because existing analytical methods will be rigorously tested and new tools will be developed. Australia has a comparatively high concentration of researchers in this field, so my research will foster domestic collaboration and import international expertise. The research will provide important insights int ....Analysing and modelling molecular rate variation among nuclear and mitochondrial genomes. My research will have important practical benefits for bioinformaticians and evolutionary biologists, because existing analytical methods will be rigorously tested and new tools will be developed. Australia has a comparatively high concentration of researchers in this field, so my research will foster domestic collaboration and import international expertise. The research will provide important insights into the rates and patterns of genetic changes associated with domestication, and into variation in evolutionary rates among the primate ancestors of humans. In addition to developing new software, which will be made publicly available, I will develop new evolutionary models to supplement existing software packages. Read moreRead less
Co-evolution of sociality and sex allocation: phylogenetic comparative approaches using insects. This project investigates the coevolution of sex allocation and sociality. Although linkage between these two traits has long been conjectured in evolutionary ecology, and numerous studies have investigated species-specific relationships, the question of how these two features interact over evolutionary time has not been examined. Here, we apply phylogenetic comparative approaches to determine wh ....Co-evolution of sociality and sex allocation: phylogenetic comparative approaches using insects. This project investigates the coevolution of sex allocation and sociality. Although linkage between these two traits has long been conjectured in evolutionary ecology, and numerous studies have investigated species-specific relationships, the question of how these two features interact over evolutionary time has not been examined. Here, we apply phylogenetic comparative approaches to determine whether sex allocation strategies have influenced subsequent social evolution. In particular, we extend the notion of parental manipulation to ask whether mothers have been able to use sex allocation to influence alloparental behaviour in their offspring, leading to greater levels of altruism.Read moreRead less