Visual Analytics for Next Generation Sequencing. Next-generation sequencing technologies have brought a revolution in biology and healthcare, while taxing the ability of scientists and clinicians to identify and process relevant data, to make sense of it all and communicate it to others in a concise and meaningful way. This project aims to tackle this problem through fundamentally new approaches to data selection and visualisation at very large scale, actively encoding for insight into underlyin ....Visual Analytics for Next Generation Sequencing. Next-generation sequencing technologies have brought a revolution in biology and healthcare, while taxing the ability of scientists and clinicians to identify and process relevant data, to make sense of it all and communicate it to others in a concise and meaningful way. This project aims to tackle this problem through fundamentally new approaches to data selection and visualisation at very large scale, actively encoding for insight into underlying biological and biomedical processes, bringing sustainable discovery of new relationships and variations within the data. The project aims to support new approaches to medical diagnosis and treatment, and offer crucial lessons to address the broader challenge of understanding large, complex data sets.Read moreRead less
Preparing Australia For Genomic Medicine: A Proposal By The Australian Genomics Health Alliance
Funder
National Health and Medical Research Council
Funding Amount
$25,000,000.00
Summary
The sequencing of the human genome brings the possibility of more accurate identification of the underlying basis of many diseases. This technology has moved so rapidly, however, that clinical access has been limited. In this application, a national alliance of clinicians, researchers, health economists and policymakers will evaluate the case for clinical genomics across inherited disease and cancer, determine how best to deliver this to the patient and train a capable workforce.
How enhancers regulate T cell differentiation and function. This project aims to identify the molecular mechanisms that regulate the activity of transcriptional enhancers needed for effective immune cell differentiation. Adaptive immune cell activation starts a programme of differentiation that acquires and maintains lineage-specific effector function. Using a multidisciplinary approach including cellular and chromatin biology, advanced bioinformatics, targeted genome editing and nanotechnology, ....How enhancers regulate T cell differentiation and function. This project aims to identify the molecular mechanisms that regulate the activity of transcriptional enhancers needed for effective immune cell differentiation. Adaptive immune cell activation starts a programme of differentiation that acquires and maintains lineage-specific effector function. Using a multidisciplinary approach including cellular and chromatin biology, advanced bioinformatics, targeted genome editing and nanotechnology, this project expects to provide insights into non-coding regulatory element reprogramming and control of immune cell function and memory with implications for understanding general cellular differentiation.Read moreRead less
Variation in the arginine vasopressin 1a receptor (AVPR1a) gene, the social environment, general health and wellbeing. The project aims to investigate how the arginine vasopressin 1a gene affects gene expression and influences social behaviour and ultimately health and wellbeing. This research will contribute to understanding the importance of individual differences in social policy and interventions aimed at improving health and wellbeing.
Special Research Initiatives - Grant ID: SR0354693
Funder
Australian Research Council
Funding Amount
$10,000.00
Summary
Australian e-Research Grid. The e-Research Grid program will research and implement core Grid technologies on APAC and partner's deployed HPC resources, to underpin a broad range of Australian research. The computer science CIs will form collaborative links with international programs, adapting developments to local circumstances. The applications-domain CIs will leverage those into their scientific simulations and databases, using grid integrative techniques and portals. Many CIs participate in ....Australian e-Research Grid. The e-Research Grid program will research and implement core Grid technologies on APAC and partner's deployed HPC resources, to underpin a broad range of Australian research. The computer science CIs will form collaborative links with international programs, adapting developments to local circumstances. The applications-domain CIs will leverage those into their scientific simulations and databases, using grid integrative techniques and portals. Many CIs participate in other RNs linking to their motivating applications, enhancing prospects for research and integration. They participate in the APAC Grid program, leveraging 75 HPC staff nationally. A key aim is interoperability with "real-world Grids": eg e-learning & e-health programs.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0989347
Funder
Australian Research Council
Funding Amount
$350,000.00
Summary
CYCLOPS - A Better Way to Find Extrasolar Planets. The primary scientific driver for this new facility is the search for planets orbiting other stars. Australian astronomers, and the Anglo-Australian Telescope, have played a leading role in this new frontier for astronomy, detecting 25 of the 250-odd extrasolar planets known to orbit nearby stars. The CYCLOPS project brings together a team of leading Australian astronomers to build on this track record with a new facility that further advances A ....CYCLOPS - A Better Way to Find Extrasolar Planets. The primary scientific driver for this new facility is the search for planets orbiting other stars. Australian astronomers, and the Anglo-Australian Telescope, have played a leading role in this new frontier for astronomy, detecting 25 of the 250-odd extrasolar planets known to orbit nearby stars. The CYCLOPS project brings together a team of leading Australian astronomers to build on this track record with a new facility that further advances Australia's capabilities in both this field, and several other high-profile astronomical endeavours: including the study of seismology in stellar interiors, the detailed measurement of elemental abundances in stars throughout our Galaxy, and the mapping of spot features on the surfaces of stars.Read moreRead less
Understanding the koala microbiome: unlocking the secrets of koala health and dietary specialisation, and successful husbandry and translocation. This project aims to discover how the composition and function of koala gastrointestinal microbial communities differ in space and time in response to the varying nutritional quality and chemical composition of koala diets. Using detailed chemical analysis, cutting edge metagenomic and bioinformatic pipelines and powerful approaches to study enzyme fun ....Understanding the koala microbiome: unlocking the secrets of koala health and dietary specialisation, and successful husbandry and translocation. This project aims to discover how the composition and function of koala gastrointestinal microbial communities differ in space and time in response to the varying nutritional quality and chemical composition of koala diets. Using detailed chemical analysis, cutting edge metagenomic and bioinformatic pipelines and powerful approaches to study enzyme functions in the koala’s gut, the investigators aims to reveal the role of microbes in detoxification of plant toxins and degradation of recalcitrant fibre fractions. The outcomes aim to facilitate the use of faecal transplants to improve digestive function for translocated and rehabilitated koalas, enhancing options for koala management and conservation.Read moreRead less
Lifelong robotic navigation using visual perception. Service robots are becoming a major part of our working and personal environments, in much the same way as personal computers already have. This project will develop new methods of practical and useful robot navigation that will enable Australia's industries and services to remain internationally competitive.
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0346446
Funder
Australian Research Council
Funding Amount
$312,000.00
Summary
Australian Creative Resources Archive. The facility will digitise wasted cultural materials to create an accessible archive that meets the needs of Australian researchers, artists, entrepreneurs, and the public, specifically in order to stimulate broadband content development. This unique facility and associated research will: (1) provide a rich resource for broadband content development; (2) provide a platform for productive research collaborations with Australian content producers; (3) develop ....Australian Creative Resources Archive. The facility will digitise wasted cultural materials to create an accessible archive that meets the needs of Australian researchers, artists, entrepreneurs, and the public, specifically in order to stimulate broadband content development. This unique facility and associated research will: (1) provide a rich resource for broadband content development; (2) provide a platform for productive research collaborations with Australian content producers; (3) develop innovative classification systems and associated software for content development; (4) develop new intellectual property and new business models; (5) develop new ways to develop and deliver Australian broadband content; and, (6) develop new understandings of creative production processes.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE160100090
Funder
Australian Research Council
Funding Amount
$250,000.00
Summary
Computational infrastructure for developing deep machine learning models. Computational infrastructure for developing deep machine learning models:
The computational infrastructure for developing deep machine learning models aims to enable new developments in machine learning of deep neural network models by providing the specialised computing necessary to train and evaluate the networks. In the last three years, deep networks have smashed previous performance ceilings for tasks such as object ....Computational infrastructure for developing deep machine learning models. Computational infrastructure for developing deep machine learning models:
The computational infrastructure for developing deep machine learning models aims to enable new developments in machine learning of deep neural network models by providing the specialised computing necessary to train and evaluate the networks. In the last three years, deep networks have smashed previous performance ceilings for tasks such as object recognition in images, speech recognition and automatic translation, bringing the prospect of machine intelligence closer than ever. Modern machine learning techniques have had huge impact in the last decade in fields such as robotics, computer vision and data analytics. The facility would enable Australian researchers to develop, learn and apply deep networks to problems of national importance in robotic vision and big data analytics. Read moreRead less