Biophysics of the brain’s waste disposal system: Understanding why we sleep. This project aims to develop a new biophysical model of the brain, founded on the recently discovered glymphatic system responsible for waste disposal during sleep. It sets out to formulate, analyse, and validate rigorous new multiscale quantitative modelling – to advance the study of sleep and brain clearance dynamics, at timescales from hours to decades. Among expected outcomes are powerful models ready for applicatio ....Biophysics of the brain’s waste disposal system: Understanding why we sleep. This project aims to develop a new biophysical model of the brain, founded on the recently discovered glymphatic system responsible for waste disposal during sleep. It sets out to formulate, analyse, and validate rigorous new multiscale quantitative modelling – to advance the study of sleep and brain clearance dynamics, at timescales from hours to decades. Among expected outcomes are powerful models ready for application at both population and individual level, and testable predictions concerning the sleep patterns that lead to aggregation of waste in the brain and eventual cognitive decline. Project outcomes should also benefit society and the economy though translation into interventions for sleep disturbance – in future applied research.Read moreRead less
Paving the way for ultra-long haul flights: strategies to mitigate jetlag. This project aims to develop and test strategies to mitigate jetlag, founded on biophysical modelling of circadian rhythms. It sets out to quantify the speed of circadian adaptation of sleep, alertness, and metabolism after transmeridian travel and to maximise speed of adaptation via optimised timing of light exposure, food, and exercise in-flight and on-the-ground. Expected outcomes include powerful models for jetlag str ....Paving the way for ultra-long haul flights: strategies to mitigate jetlag. This project aims to develop and test strategies to mitigate jetlag, founded on biophysical modelling of circadian rhythms. It sets out to quantify the speed of circadian adaptation of sleep, alertness, and metabolism after transmeridian travel and to maximise speed of adaptation via optimised timing of light exposure, food, and exercise in-flight and on-the-ground. Expected outcomes include powerful models for jetlag strategies, ready for application in air travel. The project will directly inform Qantas’ operations for ultra-long haul flights and their international network more broadly. Project outcomes will benefit society and the economy through improving travellers’ alertness, sleep, and reducing the risk of fatigue-related accidents.Read moreRead less
The geometry of genome access: lessons from HIV. Access to the cell’s nucleus, and hence its genome, is of deep scientific and commercial significance. It is controlled by a phase-separated diffusion barrier within the nuclear pore complex. Recent evidence, however, has shown that HIV can cross this barrier with its protective capsid intact, despite it being over one thousand times larger than the limit for passive transport. Combining concepts from soft-matter physics with recombinant assays, t ....The geometry of genome access: lessons from HIV. Access to the cell’s nucleus, and hence its genome, is of deep scientific and commercial significance. It is controlled by a phase-separated diffusion barrier within the nuclear pore complex. Recent evidence, however, has shown that HIV can cross this barrier with its protective capsid intact, despite it being over one thousand times larger than the limit for passive transport. Combining concepts from soft-matter physics with recombinant assays, this project aims to uncover the link between the unique geometry of HIV capsids and their ability to subvert the nucleus’ defenses. The expected outcome is a step-change in the understanding of nuclear access control, with downstream benefits to virology, bio-engineering and bio-technology.Read moreRead less
Sinusoidal voltage protocols for characterisation of ion channel kinetics. This project aims to implement an innovative approach to modelling ion channel behaviour that employs short, information-rich datasets and parameter inference. Using the hERG potassium channel as a test case, the project will show that this approach is more efficient than current methods and outperforms all published models in independent validations. The project aims to extend on initial implementation to probe the therm ....Sinusoidal voltage protocols for characterisation of ion channel kinetics. This project aims to implement an innovative approach to modelling ion channel behaviour that employs short, information-rich datasets and parameter inference. Using the hERG potassium channel as a test case, the project will show that this approach is more efficient than current methods and outperforms all published models in independent validations. The project aims to extend on initial implementation to probe the thermodynamics and pharmacology of ion channel gating. The anticipated outcomes are to grow fundamental knowledge of ion channel biophysics and ability to probe ion channel function in silico. The project will build on an emerging collaboration between international leaders in physiology, pharmacology, mathematics and computer modelling. The methodology and fundamental knowledge generated will significantly advance our understanding of the physiology and biophysics of ion channels, while the application of the method will have direct impact in the pharmaceutical industry and regulatory science.Read moreRead less
Understanding animals through their movement. This project aims to develop a suite of analytical methods to understand animals' behaviour through their movement patterns. Animal movement patterns encode detailed information about their behavioural state. Collecting and analysing animal movement trajectories can provide us with completely new insights to behaviour. Recent developments in bio-logging technologies have provided an incredible amount of rich data on free-ranging animals. This project ....Understanding animals through their movement. This project aims to develop a suite of analytical methods to understand animals' behaviour through their movement patterns. Animal movement patterns encode detailed information about their behavioural state. Collecting and analysing animal movement trajectories can provide us with completely new insights to behaviour. Recent developments in bio-logging technologies have provided an incredible amount of rich data on free-ranging animals. This project will develop a suite of analytical techniques to interrogate this data through a combination of approaches, from fine scale experiments in the laboratory to tracking animal trajectories from the International Space Station. The findings will deliver major benefits to the broader community by transforming our ability to manage and conserve animal stocks.Read moreRead less
Sexual conflict and the evolution of nuptial gifts. This project aims to understand how sexual conflict drives the evolution of “manipulative” nuptial gifts in male arthropods and how females respond to ingesting these gifts. Nuptial food gifts comprise materials (other than sperm) that are offered by males to females to consume at mating, and are an integral feature of the mating systems of a wide variety of arthropods. The project will study the decorated cricket, a species where males produce ....Sexual conflict and the evolution of nuptial gifts. This project aims to understand how sexual conflict drives the evolution of “manipulative” nuptial gifts in male arthropods and how females respond to ingesting these gifts. Nuptial food gifts comprise materials (other than sperm) that are offered by males to females to consume at mating, and are an integral feature of the mating systems of a wide variety of arthropods. The project will study the decorated cricket, a species where males produce a nuptial food gift that contains a cocktail of chemicals known to influence female reproduction when eaten. The project is expected to strengthen Australia’s international standing in evolutionary research and help train the next generation of evolutionary biologists.Read moreRead less
Can sexual conflict contribute to a resolution of the paradox of sex? Despite over a century of research, it remains unclear why most animals can reproduce only via sex. An exciting new hypothesis proposes that sexual conflict can promote sexual reproduction and inhibit asexual strategies, suggesting a potential solution to this long-standing paradox. Building on my research expertise, and using a native Australian insect species in which the role of sexual conflict can be studied in natural pop ....Can sexual conflict contribute to a resolution of the paradox of sex? Despite over a century of research, it remains unclear why most animals can reproduce only via sex. An exciting new hypothesis proposes that sexual conflict can promote sexual reproduction and inhibit asexual strategies, suggesting a potential solution to this long-standing paradox. Building on my research expertise, and using a native Australian insect species in which the role of sexual conflict can be studied in natural populations, this ambitious project aims to test this hypothesis for the first time. This research will expand knowledge in the biological sciences by helping to answer one of the most challenging questions in evolutionary biology. This work will also contribute to efforts to monitor Australia's unique insect fauna.Read moreRead less
The mathematics of stochastic transport and signalling in cells. The project aims to develop new stochastic mathematical models of the dynamics of protein transport and cell signalling. The mathematics will link macro scale biological observations to micro scale molecular movements to characterise the relative role that different components and processes play. Expected outcomes are robust mathematical analyses of the transient dynamics of closed, finite capacity queueing networks and biological ....The mathematics of stochastic transport and signalling in cells. The project aims to develop new stochastic mathematical models of the dynamics of protein transport and cell signalling. The mathematics will link macro scale biological observations to micro scale molecular movements to characterise the relative role that different components and processes play. Expected outcomes are robust mathematical analyses of the transient dynamics of closed, finite capacity queueing networks and biological insight into the major control mechanisms in cellular insulin signalling. The project should provide significant benefits via the delivery of new mathematical tools and analysis for stochastic networks, impacting our understanding of metabolic transport, and providing interdisciplinary research training.Read moreRead less
Creation of a super-resolution map of the bacterial cytokinesis machinery . Cell division is a fundamental process essential for life. Yet our understanding of this process on a molecular level is limited, mostly hampered by the inability to visualize the different components of the division machinery inside these tiny cells with adequate resolution. To overcome this barrier, capitalizing on recent advancements in imaging and molecular technologies combined with innovative engineering, this proj ....Creation of a super-resolution map of the bacterial cytokinesis machinery . Cell division is a fundamental process essential for life. Yet our understanding of this process on a molecular level is limited, mostly hampered by the inability to visualize the different components of the division machinery inside these tiny cells with adequate resolution. To overcome this barrier, capitalizing on recent advancements in imaging and molecular technologies combined with innovative engineering, this project aims to create a spatial and temporal map of the division machinery inside bacterial cells at unprecedented resolution. The expected outcomes are new knowledge on the mechanism of bacterial division and technological advances in biological imaging, informing applications in a wide variety of sectors.Read moreRead less
How mates and sexual rivals affect reproductive costs, lifespan and ageing. This project aims to dissect the complex costs of reproduction, bridging an old divide between evolutionary and biomedical approaches to understanding ageing and lifespan. Merely detecting the smell of another individual, without ever encountering them, can cause an individual to mature sooner, age faster, or live a shorter life. These costs, and the fact that subsequent mating can restore adult ageing and lifespan to "n ....How mates and sexual rivals affect reproductive costs, lifespan and ageing. This project aims to dissect the complex costs of reproduction, bridging an old divide between evolutionary and biomedical approaches to understanding ageing and lifespan. Merely detecting the smell of another individual, without ever encountering them, can cause an individual to mature sooner, age faster, or live a shorter life. These costs, and the fact that subsequent mating can restore adult ageing and lifespan to "normal" are causing a re-evaluation of the costs of reproduction - an important but enigmatic concept in evolution. This project expects to resolve how and why the physical presence of a mate, or odour cues of such a mate, can have such dramatic effects on ageing and late-life performance.Read moreRead less