Special Research Initiatives - Grant ID: SR0566602
Funder
Australian Research Council
Funding Amount
$87,933.00
Summary
Development of a collaborative online environment and workbench for the investigation of protein folding. The investigation of protein folding – one the most important unsolved biological problems, is generating large amounts of complex data. This proposal aims to develop a highly collaborative content management system and interactive data mining tools that will allow the open exchange and analysis of protein folding data. A chief goal of this proposal is, by creating a rich informatics envir ....Development of a collaborative online environment and workbench for the investigation of protein folding. The investigation of protein folding – one the most important unsolved biological problems, is generating large amounts of complex data. This proposal aims to develop a highly collaborative content management system and interactive data mining tools that will allow the open exchange and analysis of protein folding data. A chief goal of this proposal is, by creating a rich informatics environment, to foster the exchange of ideas and rapid dissemination of new data across the international array of groups working in parallel on various aspects of the folding problem.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0882357
Funder
Australian Research Council
Funding Amount
$500,000.00
Summary
A Computational Facility for Multi-scale Modelling in Bio and Nanotechnology. Bio- and nanotechnology have the potential to transform Australian industry and research, and to bring significant benefits for consumers. The scope will include materials for energy storage, medical diagnostics and cellular imaging, bioengineering, drug and gene delivery, improved foods by molecular design, novel materials for electronics, improved techniques for particle processing, and molecular sieves for filtering ....A Computational Facility for Multi-scale Modelling in Bio and Nanotechnology. Bio- and nanotechnology have the potential to transform Australian industry and research, and to bring significant benefits for consumers. The scope will include materials for energy storage, medical diagnostics and cellular imaging, bioengineering, drug and gene delivery, improved foods by molecular design, novel materials for electronics, improved techniques for particle processing, and molecular sieves for filtering/purifying water and gases. The dedicated computing facility will enable a fast interactive cycle between simulation and experiment in these areas, accelerating the pace of research and applications.Read moreRead less
Special Research Initiatives - Grant ID: SR0567460
Funder
Australian Research Council
Funding Amount
$85,000.00
Summary
Development of a collaborative environment for high throughput biology discovery pipelines. Modern biological science involves the parallel high-throughput investigation of many hundreds of different experimental targets. Traditional approaches for recording, analysing, mining and cross comparing experimental data are inadequate for conducting high throughput experiments. This proposal aims to develop new algorithms in the high throughput arena that will revolutionize biological discovery.
High resolution single particle analysis of biological macromolecules. One of the great challenges of cell biology is to increase the rate of atomic resolution structure determination, particularly of membrane proteins and macromolecular assemblies. The current rate-limiting step is high quality crystal production. Our goal is to prove that protein structures can be determined to atomic resolution by single-particle analysis. 3D structures will be produced by computationally aligning high-resolu ....High resolution single particle analysis of biological macromolecules. One of the great challenges of cell biology is to increase the rate of atomic resolution structure determination, particularly of membrane proteins and macromolecular assemblies. The current rate-limiting step is high quality crystal production. Our goal is to prove that protein structures can be determined to atomic resolution by single-particle analysis. 3D structures will be produced by computationally aligning high-resolution electron microscope images of individual, randomly oriented molecules. The importance of this project is highlighted by the fact over 120,000 protein sequences are already databased, a number set to increase rapidly as new genome sequencing projects are completed.
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Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0989334
Funder
Australian Research Council
Funding Amount
$400,000.00
Summary
An integrated high-performance computational platform powering systems biology investigation. Systems biology is the study of the organism as a whole and provides a deeper understanding of biological processes than is possible by studying components separately. Recognised as essential for biological research, we propose to establish an advanced computational platform to study these processes at a systems level. Its hardware and specialised software will allow Australian researchers to examine co ....An integrated high-performance computational platform powering systems biology investigation. Systems biology is the study of the organism as a whole and provides a deeper understanding of biological processes than is possible by studying components separately. Recognised as essential for biological research, we propose to establish an advanced computational platform to study these processes at a systems level. Its hardware and specialised software will allow Australian researchers to examine complex pathways involved in animal and human health and disease, as well as in biotechnology and environmental processes. It will provide unique capabilities not currently available in Australia, and help Australian researchers remain internationally competitive in breakthrough science and frontier technologies.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0775673
Funder
Australian Research Council
Funding Amount
$1,200,000.00
Summary
A high throughput protein crystallization & imaging facility. Protein crystallography is an important field of research that enables us to understand the precise shape of proteins. The precise shape of a protein determines the function of a protein. This information is essential in understanding the physiological role of a protein and may be used for the development of therapeutics, where approrpiate. We aim to develop a high-throughput robotics system that will enable us to determine the sh ....A high throughput protein crystallization & imaging facility. Protein crystallography is an important field of research that enables us to understand the precise shape of proteins. The precise shape of a protein determines the function of a protein. This information is essential in understanding the physiological role of a protein and may be used for the development of therapeutics, where approrpiate. We aim to develop a high-throughput robotics system that will enable us to determine the shape of many proteins more rapidly, thereby greatly accelerating the pace of biomedical research.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0882979
Funder
Australian Research Council
Funding Amount
$400,000.00
Summary
Australian High Performance Computational Structural Biology Facility. This work will have major outcomes for structural biology research at a national and international level. For structure determination, the ability to perform massively parallel calculations will afford a timesaving of weeks to months. Further, significant insights will be gained into the use of high-performance grid computing in protein structure determination by X-ray crystallography. This knowledge has considerable impact ....Australian High Performance Computational Structural Biology Facility. This work will have major outcomes for structural biology research at a national and international level. For structure determination, the ability to perform massively parallel calculations will afford a timesaving of weeks to months. Further, significant insights will be gained into the use of high-performance grid computing in protein structure determination by X-ray crystallography. This knowledge has considerable impact on our ability to undertake high quality structural biology research - a key area in the majority of biological research programs. Software developed will be made available to academic researchers free of charge.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE100100015
Funder
Australian Research Council
Funding Amount
$200,000.00
Summary
Purchase of an ultra-performance liquid chromatograph - triple quadrupole mass spectrometer. The diverse research supported by the proposed instrument group addresses several national research priorities. It will lead to a better fundamental understanding of the hormonal control of plant growth, improved catalysts for organic synthesis including pharmaceuticals and improved food safety. In forestry it will help to increase forest productivity through mitigating losses from insect and mamm ....Purchase of an ultra-performance liquid chromatograph - triple quadrupole mass spectrometer. The diverse research supported by the proposed instrument group addresses several national research priorities. It will lead to a better fundamental understanding of the hormonal control of plant growth, improved catalysts for organic synthesis including pharmaceuticals and improved food safety. In forestry it will help to increase forest productivity through mitigating losses from insect and mammalian pests and enhancing wood quality. In pharmaceutics, improved treatments for asthma are expected. This facility will provide the infrastructure essential for many researchers to maintain internationally competitive profiles in their areas and continue to offer postgraduate training and postdoctoral opportunities.Read moreRead less
Conserving our native carnivores: the application of molecular genetics to the conservation management of quolls. Quolls, the largest native mammalian predators on mainland Australia, occupy a pivotal ecological niche. All species are declining and are threatened by a variety of interacting environmental processes. This program brings together seven wildlife agencies in a nationwide partnership for understanding and protecting quolls. We will provide new genetic data to test current populatio ....Conserving our native carnivores: the application of molecular genetics to the conservation management of quolls. Quolls, the largest native mammalian predators on mainland Australia, occupy a pivotal ecological niche. All species are declining and are threatened by a variety of interacting environmental processes. This program brings together seven wildlife agencies in a nationwide partnership for understanding and protecting quolls. We will provide new genetic data to test current population and conservation theories using four species of quolls as model taxa to inform us about past histories of populations and to measure parameters of importance to on-ground managers. Results of these projects will help guide management practices for both short- and long-term conservation of these species.Read moreRead less
Inbreeding and Amphibian Decline: from an Individual to a Global Perspective. Amphibian decline is not a phenomenon unique to overseas continents and countries. In the long line of research papers addressing this issue in the best science journals (e.g., Nature and Science), Australian frog decline has even been singled out for specific coverage. This project targets the interplay between habitat fragmentation, loss of genetic variation (inbreeding), and its effects on UV and pathogen resistance ....Inbreeding and Amphibian Decline: from an Individual to a Global Perspective. Amphibian decline is not a phenomenon unique to overseas continents and countries. In the long line of research papers addressing this issue in the best science journals (e.g., Nature and Science), Australian frog decline has even been singled out for specific coverage. This project targets the interplay between habitat fragmentation, loss of genetic variation (inbreeding), and its effects on UV and pathogen resistance in a laboratory model system. It integrates three disciplines (immunobiology, evolutionary genetics, and conservation biology) to resolve fundamental aspects of the drastic, ongoing disappearance of the most significant ecological indicator taxa known today (amphibians). Read moreRead less