Postgraduate Funding - Stock Structure And Connectivity Of Black Bream Including Implications For Management
Funder
Fisheries Research and Development Corporation
Funding Amount
$75,000.00
Summary
Understanding the demographic characteristics, connectivity and stock structure of a fish species is crucial for identifying the appropriate scale and strategy for management.
Black bream is a slow growing and long-lived finfish species with reproduction confined to estuarine habitats. It is distributed in the estuaries and inshore marine waters of southern Australia, from central NSW to central west coast WA, including Tasmania. Throughout its broad distribution, black bream is thoug ....Understanding the demographic characteristics, connectivity and stock structure of a fish species is crucial for identifying the appropriate scale and strategy for management.
Black bream is a slow growing and long-lived finfish species with reproduction confined to estuarine habitats. It is distributed in the estuaries and inshore marine waters of southern Australia, from central NSW to central west coast WA, including Tasmania. Throughout its broad distribution, black bream is thought to be composed of a number of isolated spawning stocks, with limited evidence of movements between estuaries.
In SA, black bream supports important commercial fisheries, and is highly sought-after by recreational anglers. Most of the State-wide commercial catch is taken by the Lakes and Coorong Fishery (LCF) in the Coorong estuary, with smaller contributions taken by the Marine Scalefish Fishery. In 2016, the LCF for black bream, which was historically one of Australia’s most productive black bream fisheries, was classified as ‘overfished’. It is unknown whether this status is reflective of the broader population in SA waters, or if current management arrangements for the Coorong population, which are aimed to promote stock recovery, are adequate in terms of the spatial scale that they apply.
There is a need to understand the demography, connectivity and stock structure of black bream populations across southern Australia (SA, VIC and WA). This information will assist in identifying appropriate scales and strategies for management.
‘People development’ is one of several priorities identified in the FRDC’s RD&E Plan 2015-20. The proposed project will be undertaken by a high-performing student as a PhD project. The student will undertake applied research relevant to FRDC stakeholders (scientists, fishery managers, commercial, recreational and indigenous fishers) in SA, and gain industry experience by being co-supervised by scientists from SARDI. The project will increase fisheries science capacity in SA through training of the next generation of researchers.
Objectives: 1. Define the stock structure of black bream in southern Australia using a multi-methods approach incorporating genetics/genomics and otolith-based techniques 2. Review information on and determine how black bream respond to changing environmental conditions 3. Provide recommendations for fishery managers based on results of stock structure analyses 4. Increase fisheries science capacity in South Australia through training of the next generation of researchers Read moreRead less
Gulf Of Carpentaria King Threadfin (Polydactylus Macrochir) - Addressing The Knowledge Gaps To Support Assessment, Management And Sustainable Harvest
Funder
Fisheries Research and Development Corporation
Funding Amount
$1,410,230.50
Summary
The proposal addresses the key needs specified in FRDC investment opportunity on GoC KTF in an integrated manner, in consultation and collaboration with industry, by a team of people highly experienced in the science and logistical challenges of working in the GoC. The ‘Needs’ in the FRDC Call for R&D Investment Opportunities were (1) stock structure, including spatial and temporal connectivity between regions (i.e., movement and reproductive connectivity), (2) quantify life history information ....The proposal addresses the key needs specified in FRDC investment opportunity on GoC KTF in an integrated manner, in consultation and collaboration with industry, by a team of people highly experienced in the science and logistical challenges of working in the GoC. The ‘Needs’ in the FRDC Call for R&D Investment Opportunities were (1) stock structure, including spatial and temporal connectivity between regions (i.e., movement and reproductive connectivity), (2) quantify life history information at regional scales relevant to stock assessment, and (3) factors influencing variation in the relationship between catch rate and population abundance.
The proposal addresses these knowledge gaps, which continue to bring uncertainty to the GoC KTF assessment and management. Further details are included in the Methods section.
It is critical that the inputs to the stock assessment, such as the spatial structure of the model, standardised catch rates, and life history parameters (e.g., temporal and spatial variation in growth rates, proportion mature-at-age, proportion mature-at-length) are representative of GoC stocks. Independent review of the latest KTF stock assessment (Campbell et al. 2024) concurs with this statement. Past research has included GoC samples of varying levels of spatial representativeness (Garrett et al. 1997; Welch et al. 2010; Newman et al. 2010; Moore et al. 2011; Moore et al. 2017) primarily due to due to logistical challenges. Despite the past research, there remains spatial and temporal uncertainty in how KTF populations function in this large tropical region, which has highly variable patterns in wet season rainfall and flood - the primary drivers of nutrient input to coastal GoC ecosystems.
Objectives: 1. Evaluate the spatial stock structure and the connectivity and movement of King Threadfin between regions within the Gulf of Carpentaria to inform meta-population dynamics. 2. Quantify life history parameters of King Threadfin across regions within the Gulf of Carpentaria relevant to stock assessment and management. 3. Evaluate factors influencing the relationship between catch (rate) and population abundance to inform catch rate standardisation. Read moreRead less
Assessing The Biology And Connectivity Of Deep-water Finfish On Australia’s East Coast And The Impact Of Fleet Dynamics
Funder
Fisheries Research and Development Corporation
Funding Amount
$433,228.00
Summary
Deep-water finfish are an increasingly important fisheries resource on Australia's east coast that has been subjected to recent and rapid growth in fishing pressure across commercial, recreational, and charter sectors. Drivers of increased targeting of deep-water species likely include depletion of inshore stocks leading to effort shifts to deeper areas, advances in technology facilitating more effective targeting of deep-water species and changing market dynamics leading to increased profitabil ....Deep-water finfish are an increasingly important fisheries resource on Australia's east coast that has been subjected to recent and rapid growth in fishing pressure across commercial, recreational, and charter sectors. Drivers of increased targeting of deep-water species likely include depletion of inshore stocks leading to effort shifts to deeper areas, advances in technology facilitating more effective targeting of deep-water species and changing market dynamics leading to increased profitability. However, sustainable management of deep-water finfish stocks requires species-specific information on fundamental life history characteristics and stock structure to inform evidence-based management that is currently lacking.
Deep-water species are often characterised by slow growth, late maturity, and clustered distributions around pockets of suitable habitat that leave them vulnerable to overfishing. It is necessary to determine how such traits and connectivity among populations affect the sustainability of fisheries for key deep-water species on Australia's east coast. Management of deep-water species is also complicated by cross-jurisdictional distributions including Queensland, New South Wales, and Commonwealth managed fisheries.
Currently, due to the lack of fundamental biological information, key deep-water species are managed using basic harvest strategies set to trigger enhanced management and scientific focus when such need arises, which is now occurring. For example, the 2021 commercial harvest of Bar Cod (Epinephelus ergastularius) in Queensland exceeded double the mean harvest from 2011-2015, triggering a requirement for the first stock assessment of this species. Anecdotally, recreational catches in Queensland of other key species including Flametail Snapper (Etelis coruscans) and Goldband Snapper (Pristipomoides multidens) have substantially increased in recent years, with the latter given priority status for future stock assessment. New South Wales DPI has indicated a particular need for research focus on Bass groper (Polyprion americanus) and Hapuku (Polyprion oxygeneios) due to the complete lack of biological information required for fisheries management of these species, both of which are now quota managed. Recreational fishing effort is important to quantify because this sector has come to dominate the deep-water fishery in some areas where commercial fishing effort is sparse. Changing fleet dynamics and the uptake of technological advances in fishing gear have also increased fishing power for deep-water species in ways that are poorly understood.
This project aims to address these issues with a cross-jurisdictional collaboration between Qld DAF, NSW DPI, and AFMA supported by the University of Queensland providing fundamental information on the biology and population connectivity of key deep-water species. Project staff are well placed to leverage their existing networks and will also build new relationships with stakeholders throughout the deep-water fishery to pursue sample collection from all available sources including commercial fishers, processors, and recreational and charter fishers. Archived samples and targeted fishery-independent sampling will also be employed to secure sufficient samples to provide confident estimates on life history parameters and population connectivity to inform stock assessment. Additionally, we aim to develop novel methods to improve recreational reporting of deep-water catches and improve estimates of fishing power effects on catches of deep-water finfish.
Objectives: 1. Describe the life history characteristics of key deep-water species, e.g., Bar Cod, Flametail Snapper, and Goldband Snapper 2. Understand the stock structure and connectivity of deep-water species in Queensland and New South Wales 3. Investigate and implement novel methods for improving recreational catch reporting of deep-water species 4. Improve estimates of fishing power in the deep-water line fishery by reviewing (as opposed to trialling) historic and current fishing technologies Read moreRead less
Shallow water carbonate sediment dissolution in the global carbon cycle. Carbonate sediment dissolution is a globally significant process, but poorly understood in shallow marine waters. This project will determine whether the combined effect of organic matter, ocean acidification and pore water flow in shallow water carbonate sediments increases the release of calcium and alkalinity to the ocean. This project is significant because this release has not previously been accounted for and may lead ....Shallow water carbonate sediment dissolution in the global carbon cycle. Carbonate sediment dissolution is a globally significant process, but poorly understood in shallow marine waters. This project will determine whether the combined effect of organic matter, ocean acidification and pore water flow in shallow water carbonate sediments increases the release of calcium and alkalinity to the ocean. This project is significant because this release has not previously been accounted for and may lead to an additional uptake of atmospheric carbon dioxide into the global ocean, maybe some additional buffering against ocean acidification, but unfortunately, maybe also a loss of carbonate ecosystems. The outcomes of this project will make a significant contribution to our understanding of the global carbon cycle.
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Can eco-evolutionary theories explain outcomes of microbiome coalescence . Environmental microbial communities are among the most abundant and diverse natural communities, responsible for many ecologically and economically important ecosystem functions, including primary productivity and climate regulation. This project aims to identify the biotic and abiotic factors that regulate community and functional outcomes of microbiome coalescence (the mixing of two different communities) caused by natu ....Can eco-evolutionary theories explain outcomes of microbiome coalescence . Environmental microbial communities are among the most abundant and diverse natural communities, responsible for many ecologically and economically important ecosystem functions, including primary productivity and climate regulation. This project aims to identify the biotic and abiotic factors that regulate community and functional outcomes of microbiome coalescence (the mixing of two different communities) caused by natural and anthropogenic activities. The outcomes will provide a unifying ecological framework to predict variation in microbiomes across different scales, ecosystem types and disturbances, and will generate critical knowledge for the development of effective microbiome products, a rapidly growing industryRead moreRead less
Placental nutrient transport shows how complex traits evolve. This project aims to use amino acid transport in the vertebrate placenta as a model to demonstrate how genes are recruited and modified to produce a major organ. Using an innovative combination of a new technology, selected reaction monitoring, and transcriptomic and molecular approaches, plus carefully selected Australian species pairs, this project will study the evolution of a complex trait (placental amino acid transport). The pr ....Placental nutrient transport shows how complex traits evolve. This project aims to use amino acid transport in the vertebrate placenta as a model to demonstrate how genes are recruited and modified to produce a major organ. Using an innovative combination of a new technology, selected reaction monitoring, and transcriptomic and molecular approaches, plus carefully selected Australian species pairs, this project will study the evolution of a complex trait (placental amino acid transport). The project will provide fundamental advances in our knowledge of the nutrient transport during pregnancy that is required to produce a healthy baby.Read moreRead less
Multi-service assessment of intertidal treatment wetlands. This project aims to investigate the use of constructed intertidal wetlands to reduce nitrogen pollution while providing co-benefits including carbon sequestration and biodiversity. This research will generate a holistic assessment of the services, disservices, and cost-effectiveness of intertidal treatment wetlands compared to traditional wastewater treatment approaches. Expected outcomes include a full-scale multi-disciplinary environm ....Multi-service assessment of intertidal treatment wetlands. This project aims to investigate the use of constructed intertidal wetlands to reduce nitrogen pollution while providing co-benefits including carbon sequestration and biodiversity. This research will generate a holistic assessment of the services, disservices, and cost-effectiveness of intertidal treatment wetlands compared to traditional wastewater treatment approaches. Expected outcomes include a full-scale multi-disciplinary environmental and economic assessment of a constructed treatment wetland in a new urban development, providing industry and government partners the knowledge required to broaden uptake of intertidal wetlands as a cost-effective solution to growing levels of coastal anthropogenic pollution.Read moreRead less
Tree-mediated methane fluxes: A new frontier in the global carbon cycle. Methane is an extremely potent greenhouse gas. Recent evidence suggests that tree-mediated fluxes may be a significant, but overlooked source of methane to the atmosphere. This project aims to quantify the magnitude and drivers of tree-mediated methane fluxes from Australia’s dominant forest types. Innovatively, we will be using a novel combination of empirical field based measurements, gas tracer experiments, microbial ana ....Tree-mediated methane fluxes: A new frontier in the global carbon cycle. Methane is an extremely potent greenhouse gas. Recent evidence suggests that tree-mediated fluxes may be a significant, but overlooked source of methane to the atmosphere. This project aims to quantify the magnitude and drivers of tree-mediated methane fluxes from Australia’s dominant forest types. Innovatively, we will be using a novel combination of empirical field based measurements, gas tracer experiments, microbial analysis and modelling methods. Expected outcomes are a mechanistic understanding of tree-mediated methane fluxes, helping to constrain regional, national and global methane budgets. The results of this study will help inform publicly funded greenhouse gas abatement strategies, ensuring a maximal return on investment.Read moreRead less
A Universal Power Law for Growth and Diversity of Dinosaur and Bird Beaks. Universal rules that govern how animals grow have tremendous power to explain the highly complex processes of growth and development. The project investigators have recently discovered a new rule of growth that controls how teeth, horns, claws and beaks are generated in animals. This project aims to use this new rule to examine the evolution and diversity of beaks in birds and dinosaurs. By combining 3D modelling, biomech ....A Universal Power Law for Growth and Diversity of Dinosaur and Bird Beaks. Universal rules that govern how animals grow have tremendous power to explain the highly complex processes of growth and development. The project investigators have recently discovered a new rule of growth that controls how teeth, horns, claws and beaks are generated in animals. This project aims to use this new rule to examine the evolution and diversity of beaks in birds and dinosaurs. By combining 3D modelling, biomechanics and genetic analysis of bird beak development with the study of dinosaur fossils, this project expects to reveal the underlying processes controlling the growth and evolution of beaks. The anticipated goal of this project is to show the power of new theoretical models to explain the diversity of life.Read moreRead less
Australian Laureate Fellowships - Grant ID: FL190100062
Funder
Australian Research Council
Funding Amount
$3,130,000.00
Summary
A new functional approach to coral reefs. This project aims to identify the key ecosystem functions that are needed to sustain coral reefs and determine their susceptibility to disturbance. Around the world coral reefs are changing fast, challenging traditional scientific, management, and governance approaches. This project plans to address this challenge by implementing a new, functional, approach exploiting a unique combination of evolutionary and ecological methodologies. Expected outcomes in ....A new functional approach to coral reefs. This project aims to identify the key ecosystem functions that are needed to sustain coral reefs and determine their susceptibility to disturbance. Around the world coral reefs are changing fast, challenging traditional scientific, management, and governance approaches. This project plans to address this challenge by implementing a new, functional, approach exploiting a unique combination of evolutionary and ecological methodologies. Expected outcomes include a global overview of ecosystem function and an in-depth understanding of how ecosystems change over time. This is likely to result in specific, and practical, management objectives by identifying crucial ecosystem functions that support reefs and the people who rely on them. Read moreRead less