The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molec ....The role of genome reorganisation in adaptation and speciation. Local adaptation and speciation are fundamental evolutionary processes that rely on changes to the genome. However, the role of genome architecture (e.g. chromosomal rearrangements, gene duplications) in driving these processes is poorly understood. This project will use advanced comparative genomics and bioinformatics to examine the role of chromosome rearrangements in driving adaptation and speciation, and evaluate rates of molecular evolution between the X-chromosome and autosomes. Utilising Australia’s endemic mammalian fauna as a tractable model system, I will link population processes with macro-evolutionary outcomes to show how genome architecture underpins biodiversity.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150101904
Funder
Australian Research Council
Funding Amount
$385,481.00
Summary
Interactions of sexual selection & ecological divergence during speciation. Understanding the processes driving speciation is fundamental to understanding how biodiversity is generated. The two main forces underlying speciation, ecological divergence and sexual selection, are well characterised, yet how they interact during the speciation process is remarkably poorly understood. This project aims to test hypotheses regarding how ecological divergence and sexual selection interact during speciati ....Interactions of sexual selection & ecological divergence during speciation. Understanding the processes driving speciation is fundamental to understanding how biodiversity is generated. The two main forces underlying speciation, ecological divergence and sexual selection, are well characterised, yet how they interact during the speciation process is remarkably poorly understood. This project aims to test hypotheses regarding how ecological divergence and sexual selection interact during speciation, from its inception to its completion. In doing so, this research aims to identify genomic regions underlying divergence in colour patterns, which are important for ecological and sexual interactions. Consequently, this project will significantly enhance our understanding of ecological and genetic mechanisms underlying speciation.Read moreRead less
The role of leaf veins in vascular plant evolution. Leaves are continuously irrigated by a system of internal plumbing that defines their maximum photosynthetic output, and angiosperms are the most productive plants on earth largely by virtue of a uniquely efficient system of leaf plumbing. This project will identify how such an important modification of leaf water transport came to evolve.
Computing the climate-life history nexus for Australia's fauna. Life histories are the trajectories organisms follow as they develop, grow, reproduce and age; they are shaped by evolution and limited by the physical and biological environment. Recent breakthroughs by the CI allow the computation of life histories in any sequence of climatic environments, with demonstrated potential to gain new insights into the past, present and future responses of species to climate variability and change. This ....Computing the climate-life history nexus for Australia's fauna. Life histories are the trajectories organisms follow as they develop, grow, reproduce and age; they are shaped by evolution and limited by the physical and biological environment. Recent breakthroughs by the CI allow the computation of life histories in any sequence of climatic environments, with demonstrated potential to gain new insights into the past, present and future responses of species to climate variability and change. This project aims to apply the new methods to understand how species' life histories have adapted to Australia's unique physical conditions and predict how they will respond to future conditions. It will simultaneously lay the foundations for a long-term, open-access research program on species' climate responses.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE150101773
Funder
Australian Research Council
Funding Amount
$369,536.00
Summary
Bayesian Hierarchical Model for Biogeography. Species Distribution Models (SDMs) are crucial tools for conservation and planning, but they assume that environmental variables (e.g. temperature) are the only controls on distributions, when historical factors, like dispersal limitation and phylogenetic niche conservatism, are also important. A Bayesian Hierarchical Model (BHM) will be constructed to jointly estimate dispersal history, niche evolution, and present-day SDMs for each species in a cla ....Bayesian Hierarchical Model for Biogeography. Species Distribution Models (SDMs) are crucial tools for conservation and planning, but they assume that environmental variables (e.g. temperature) are the only controls on distributions, when historical factors, like dispersal limitation and phylogenetic niche conservatism, are also important. A Bayesian Hierarchical Model (BHM) will be constructed to jointly estimate dispersal history, niche evolution, and present-day SDMs for each species in a clade. BHMs will be tested against traditional SDMs using Australian clades (e.g. frogs) and simulations. BHMs will advance scientific understanding of how species and biogeography coevolve and provide practical improvements in predictions for species that are rare, data-poor, or in changed climates.Read moreRead less
Unifying the mechanisms that drive spatial patterns in biological traits. The project aims to resolve the mechanisms that generate spatial variation in biological traits. This project expects to overcome several significant shortcomings of previous investigations by using mechanistic modelling, field-based ecophysiological studies, and macroecological analyses to develop a single, integrated approach to investigating geographic variation in size, colour, life history and reproduction. The expect ....Unifying the mechanisms that drive spatial patterns in biological traits. The project aims to resolve the mechanisms that generate spatial variation in biological traits. This project expects to overcome several significant shortcomings of previous investigations by using mechanistic modelling, field-based ecophysiological studies, and macroecological analyses to develop a single, integrated approach to investigating geographic variation in size, colour, life history and reproduction. The expected outcomes are a comprehensive empirical test of a unified mechanism for spatial trait variation, using a diverse terrestrial vertebrate lineage as a model system. The results of this study should provide a powerful framework for predicting future patterns of biological trait variation under anthropogenic climate change.Read moreRead less
Evolution and role of neo-sex chromosomes in mitonuclear co-evolution. This project aims to characterize the evolution of novel, extended sex chromosomes in an Australian bird, then elucidate their role in climate-associated adaptive evolution. The species falls into two lineages bearing distinct mitochondrial genomes and nuclear-encoded mitochondrial genes carried on sex chromosomes. The project aims to test whether this extraordinary genome arrangement is splitting the species into two forms: ....Evolution and role of neo-sex chromosomes in mitonuclear co-evolution. This project aims to characterize the evolution of novel, extended sex chromosomes in an Australian bird, then elucidate their role in climate-associated adaptive evolution. The species falls into two lineages bearing distinct mitochondrial genomes and nuclear-encoded mitochondrial genes carried on sex chromosomes. The project aims to test whether this extraordinary genome arrangement is splitting the species into two forms: one adapted to hotter, drier environments, one to milder ones. This would be tackled using an innovative combination of genomics, cytogenetics, and metabolic data. Understanding the mechanisms at play would represent a major advance in ecology and evolution, with potential implications for conservation management.Read moreRead less
The evolutionary genetics of adaptation in species with separate sexes. This project aims to provide new theory and analysis methods for studying the genetic basis of female and male fitness. The project expects to provide new insights into the evolutionary, genetic and demographic mechanisms that influence evolutionary genetic diversity within populations. The project will reveal how sex differences in selection affect adaptation, and provide a framework for predicting whether populations with ....The evolutionary genetics of adaptation in species with separate sexes. This project aims to provide new theory and analysis methods for studying the genetic basis of female and male fitness. The project expects to provide new insights into the evolutionary, genetic and demographic mechanisms that influence evolutionary genetic diversity within populations. The project will reveal how sex differences in selection affect adaptation, and provide a framework for predicting whether populations with separate sexes are able to persist under changing environmental conditions. By developing a rigorous theoretical foundation for sex-specific adaptation – including genome inference methods that follow logically from the theory – the proposal will define new approaches for studying evolutionary processes in natural populations.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE170100354
Funder
Australian Research Council
Funding Amount
$372,000.00
Summary
How adaptation increases the intensity of sexual conflict. This project aims to test a theory that a species’ adaptation to its environment may cause sexual conflicts where gene variants increase the fitness of one sex but decrease it in the other. When populations harbour large numbers of these sexually antagonistic genes, adaptation is hampered and extinction becomes more likely. This project will fuse experimental evolution with quantitative genetic approaches to test this theory. Understandi ....How adaptation increases the intensity of sexual conflict. This project aims to test a theory that a species’ adaptation to its environment may cause sexual conflicts where gene variants increase the fitness of one sex but decrease it in the other. When populations harbour large numbers of these sexually antagonistic genes, adaptation is hampered and extinction becomes more likely. This project will fuse experimental evolution with quantitative genetic approaches to test this theory. Understanding sex differences in adaptation and the evolution of sexual dimorphism could enable scientists to predict levels of sexually deleterious variation under changing environmental conditions. Its findings are expected to provide new insights into sex differences in adaptation.Read moreRead less