To flee or not to flee: surviving on incomplete information. Even lowly animals, like the Australian fiddler crabs we will be investigating, are surprisingly competent in making the right decisions in complex situations. They actively acquire information and make good use of it to assure their immediate safety and their long term gains. Animals are exquisitely honed by evolution and we would benefit greatly by understanding what makes them so competent: on a theoretical level, we may learn about ....To flee or not to flee: surviving on incomplete information. Even lowly animals, like the Australian fiddler crabs we will be investigating, are surprisingly competent in making the right decisions in complex situations. They actively acquire information and make good use of it to assure their immediate safety and their long term gains. Animals are exquisitely honed by evolution and we would benefit greatly by understanding what makes them so competent: on a theoretical level, we may learn about efficient rules of good decision making and on a practical level, we may be able to design more flexible, robust and clever machines. Besides being useful in this wider context, the results of our research will thus also contribute to a new and 'sophisticated' appreciation of the cognitive design of animal.Read moreRead less
Evolution of sound localisation in vertebrates: head size, sound frequency and neural phase-locking. Hearing is our most important sense for interpersonal communication, yet we have a fragmentary understanding of the basic mechanisms involved in normal hearing. This project addresses the question of how sound location is represented in the brain through the processing of minute time difference with which sounds reach the two ears. The outcome will ultimately enable us to infer how the human brai ....Evolution of sound localisation in vertebrates: head size, sound frequency and neural phase-locking. Hearing is our most important sense for interpersonal communication, yet we have a fragmentary understanding of the basic mechanisms involved in normal hearing. This project addresses the question of how sound location is represented in the brain through the processing of minute time difference with which sounds reach the two ears. The outcome will ultimately enable us to infer how the human brain localises sound, with practical applications for improved virtual auditory realities and hearing aids.Read moreRead less
Stuctural analysis of RNA polymerase elongation complexes. RNA polymerase (RNAP) is an essential enzyme in all living cells. Its role is to convert the genetic information stored in genes into a message that can be converted into protein. Many additional factors are required to ensure that this enzyme functions correctly in the cell. The aim of this project is to obtain structural information on a bacterial RNAP complexed with an essential transcription factor called NusA. Using this information ....Stuctural analysis of RNA polymerase elongation complexes. RNA polymerase (RNAP) is an essential enzyme in all living cells. Its role is to convert the genetic information stored in genes into a message that can be converted into protein. Many additional factors are required to ensure that this enzyme functions correctly in the cell. The aim of this project is to obtain structural information on a bacterial RNAP complexed with an essential transcription factor called NusA. Using this information, plus data already obtained on the structure of this enzyme complexed with another essential factor called sigma, we will design small molecules to inhibit the interaction of these essential factors with polymerase. These molecules will serve as leads for the development of new antibiotics.Read moreRead less
Plasmid maintenance and interactions with the host cell and its genome. Plasmids are extrachromosomal genetic elements that play a central role in the evolution of bacteria. They are the most dynamic component of the bacterial genome, augmenting the host chromosome by conferring a range of significant phenotypes that facilitate environmental adaptation. This project aims to elucidate fundamental aspects of the relationship between plasmids and their bacterial hosts. Significant outcomes include ....Plasmid maintenance and interactions with the host cell and its genome. Plasmids are extrachromosomal genetic elements that play a central role in the evolution of bacteria. They are the most dynamic component of the bacterial genome, augmenting the host chromosome by conferring a range of significant phenotypes that facilitate environmental adaptation. This project aims to elucidate fundamental aspects of the relationship between plasmids and their bacterial hosts. Significant outcomes include understanding the molecular basis of efficient plasmid inheritance in bacterial populations, and exploration of the innovative hypothesis that plasmids modulate expression of the host chromosome, a possibility that would profoundly alter our view of how plasmids influence host phenotype.Read moreRead less
Understanding how the primate brain processes visual information. Being able to see is a crucial aspect of our daily lives, which happens so effortlessly that it tends to be taken for granted. In comparison with other animals and artificial systems, the primate visual cortex is unsurpassed in its capacity to interpret complex and dynamic environments, in a manner that is fast and computationally robust. Discovering how this happens in terms of interactions between cells in the brain can help us ....Understanding how the primate brain processes visual information. Being able to see is a crucial aspect of our daily lives, which happens so effortlessly that it tends to be taken for granted. In comparison with other animals and artificial systems, the primate visual cortex is unsurpassed in its capacity to interpret complex and dynamic environments, in a manner that is fast and computationally robust. Discovering how this happens in terms of interactions between cells in the brain can help us design more efficient artificial systems capable of vision. This in turn can have profound implications for the creation of new technologies such as artificial eyes, autonomous robots, and intelligent sensors, and may also result in future benefits for medical science.Read moreRead less
Colour vision in marsupials. The ability to distinguish colours is a crucial aspect of vision, providing vital data for sexual selection, predator detection and food acquisition. Studies of mammalian colour vision have largely overlooked marsupials. Our recent investigation of spectral sensitivity in two Australian species revealed a colour discrimination capacity beyond that of placentals (excluding primates), implying disparate evolutionary pressures in the two groups. We will provide the fi ....Colour vision in marsupials. The ability to distinguish colours is a crucial aspect of vision, providing vital data for sexual selection, predator detection and food acquisition. Studies of mammalian colour vision have largely overlooked marsupials. Our recent investigation of spectral sensitivity in two Australian species revealed a colour discrimination capacity beyond that of placentals (excluding primates), implying disparate evolutionary pressures in the two groups. We will provide the first comprehensive description of colour vision in marsupials, studying species with differing rhythmicities, habitats and diets. Wavelength sensitivity and molecular structure of retinal visual pigments will be assessed in relation to evolutionary influences and ecological demands.
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Anti-ageing role for relaxin in blood vessels. Arteries stiffen with age. This is due to increased arterial smooth muscle tone and alterations in the extracellular matrix. In a sense, the artery undergoes ?fibrosis? with aging. In light of the anti-fibrotic attributes of the peptide hormone relaxin observed in other tissues, this collaborative project will investigate the potential role for relaxin in opposing arterial ?fibrosis? associated with aging. We will test the hypothesis that a reductio ....Anti-ageing role for relaxin in blood vessels. Arteries stiffen with age. This is due to increased arterial smooth muscle tone and alterations in the extracellular matrix. In a sense, the artery undergoes ?fibrosis? with aging. In light of the anti-fibrotic attributes of the peptide hormone relaxin observed in other tissues, this collaborative project will investigate the potential role for relaxin in opposing arterial ?fibrosis? associated with aging. We will test the hypothesis that a reduction in arterial relaxin expression in older animals is a major cause of arterial stiffening. Further studies will investigate the mechanisms by which relaxin administration can alleviate this phenomenon.Read moreRead less
Relaxin action in the heart, kidney, lung and uterus: understanding fibrosis. Relaxin is a peptide hormone associated with pregnancy. We have recently generated a relaxin gene knockout mouse and exciting preliminary data show that without relaxin, non-pregnant mice develop signs of fibrosis in the heart, lung and uterus. Combining our expertise in molecular biology, pharmacology and physiology, the overall objective of this project is to investigate the functions and mechanisms of relaxin action ....Relaxin action in the heart, kidney, lung and uterus: understanding fibrosis. Relaxin is a peptide hormone associated with pregnancy. We have recently generated a relaxin gene knockout mouse and exciting preliminary data show that without relaxin, non-pregnant mice develop signs of fibrosis in the heart, lung and uterus. Combining our expertise in molecular biology, pharmacology and physiology, the overall objective of this project is to investigate the functions and mechanisms of relaxin action in these organs. Our findings will provide important basic information on relaxin physiology and enable us to implement a long-term partnership with Connetics to understand how relaxin regulates collagen production and/or the development of fibrosis.Read moreRead less
Target detection in visual clutter. The interdisciplinary nature of the project will offer a stimulating environment for training a postdoctoral worker in the hot topic of computational neuroscience. While computationally expensive solutions to moving target detection in clutter have been implemented using conventional engineering, this project will offer insight into the efficiency of the biological brain (with benefit of millions of years of evolution towards compact, economical and optimal so ....Target detection in visual clutter. The interdisciplinary nature of the project will offer a stimulating environment for training a postdoctoral worker in the hot topic of computational neuroscience. While computationally expensive solutions to moving target detection in clutter have been implemented using conventional engineering, this project will offer insight into the efficiency of the biological brain (with benefit of millions of years of evolution towards compact, economical and optimal solutions). The results will assist development of efficient artificial intelligence. It will also assist our ongoing collaborations with defence partners to develop and apply algorithms in artificial vision systems. Read moreRead less
DNA Dynamics is Shear and Extensional Flows: Simulation and Single Molecule Experiments. The proposal seeks to establish a collaboration between Monash University and Stanford University in order to combine several recent experimental and theoretical advances that have been made by the individual groups in single molecule experimental techniques, extensional rheometry, and molecular rheology, to obtain new insights into the structure and dynamics of biopolymers. The central aim is to make a sign ....DNA Dynamics is Shear and Extensional Flows: Simulation and Single Molecule Experiments. The proposal seeks to establish a collaboration between Monash University and Stanford University in order to combine several recent experimental and theoretical advances that have been made by the individual groups in single molecule experimental techniques, extensional rheometry, and molecular rheology, to obtain new insights into the structure and dynamics of biopolymers. The central aim is to make a significant contribution towards bringing state-of-the-art techniques used for the characterization of polymeric systems to bear on the nature and origin of the elastic properties of biopolymers.Read moreRead less