Discovery Early Career Researcher Award - Grant ID: DE150101150
Funder
Australian Research Council
Funding Amount
$362,000.00
Summary
Using sponge transcriptomes to understand ancestral animal development. The invention of a basic developmental program was likely a key step in the transition to multicellularity in animals, one of the major transitions in the tree of life. By combining next-generation sequencing of a representative panel of sponges and functional studies on an oviparous sponge, this project aims to identify gene interactions and networks that built the first animal embryos over 680 million years ago. Furthermor ....Using sponge transcriptomes to understand ancestral animal development. The invention of a basic developmental program was likely a key step in the transition to multicellularity in animals, one of the major transitions in the tree of life. By combining next-generation sequencing of a representative panel of sponges and functional studies on an oviparous sponge, this project aims to identify gene interactions and networks that built the first animal embryos over 680 million years ago. Furthermore, the role of Wingless (Wnt) signalling in patterning these ancestral embryos along a primordial anterior-posterior axis will be investigated. Piecing together the fundamental molecular machinery shared by all animal embryos will shed light on the molecular basis for the complex development of most animals on Earth.Read moreRead less
The essence of being an animal: sponge allorecognition and the evolution of individuality. The human genome encodes the ability to recognise self from nonself at the cellular level. In medicine, this innate ability results in the rejection of transplanted (grafted) tissues from unrelated individuals. This project seeks to get to the evolutionary foundation of self-nonself recognition by studying this process in a simple and tractable model - a sponge from the Great Barrier Reef. Like humans, spo ....The essence of being an animal: sponge allorecognition and the evolution of individuality. The human genome encodes the ability to recognise self from nonself at the cellular level. In medicine, this innate ability results in the rejection of transplanted (grafted) tissues from unrelated individuals. This project seeks to get to the evolutionary foundation of self-nonself recognition by studying this process in a simple and tractable model - a sponge from the Great Barrier Reef. Like humans, sponges reject cells and tissues derived from another individual. By defining the genetic basis of self-recognition in sponges we reveal the antiquity of this system and the core features of histocompatibility and immunity. Such insights can inform a range of regenerative medical pursuits.Read moreRead less
Origin of genomically-encoded communication in animals: deciphering the role of peptide signalling in the sea sponge Amphimedon queenslandica. The purpose of this research is to understand the evolutionary origin and essential roles of peptide communication in humans and other animals. Knowledge gleaned from this study will shed light on how peptide signalling influences animal life at its most fundamental level, including potentially how abnormal cell communication causes disease.
Evolutionary origin of stem cells and the emergence of animal complexity. The project aims to decipher the fundamental mechanisms governing stem cell specification and formation. All animals rely on stem cells to replenish, repair and regenerate tissues. Stem cells are also often a conduit to malignant tumours. This project seeks to uncover the rules governing stem cell formation through the study of a simple and ancient animal – the marine sponge Amphimedon queenslandica. The project plans to c ....Evolutionary origin of stem cells and the emergence of animal complexity. The project aims to decipher the fundamental mechanisms governing stem cell specification and formation. All animals rely on stem cells to replenish, repair and regenerate tissues. Stem cells are also often a conduit to malignant tumours. This project seeks to uncover the rules governing stem cell formation through the study of a simple and ancient animal – the marine sponge Amphimedon queenslandica. The project plans to combine insights from the simple, experimentally-tractable sponge stem cell system with existing knowledge of stem cell specification in humans and other animals, to reveal the essential features of stem cell formation. These insights may inform future pursuits to generate, control and use stem cells in cancer and regenerative medicines.Read moreRead less
Evolution of environmental regulation of cell states in animal life cycles. This project seeks to understand how the environment influences the fate of cells over an animal's life, and how this influence originated in animal evolution. Using a homegrown Australian model, a sea sponge from the Great Barrier Reef, and advanced multi-omic approaches (genomics plus cell biology), this project aims to uncover the mechanisms underlying global cell state changes that are induced through the interplay o ....Evolution of environmental regulation of cell states in animal life cycles. This project seeks to understand how the environment influences the fate of cells over an animal's life, and how this influence originated in animal evolution. Using a homegrown Australian model, a sea sponge from the Great Barrier Reef, and advanced multi-omic approaches (genomics plus cell biology), this project aims to uncover the mechanisms underlying global cell state changes that are induced through the interplay of environmental and endogenous signals at metamorphosis. Because of the evolutionary position of sponges, outcomes of this project expect to reveal the cardinal rules governing environmentally-induced cell state changes that are obligatory for most animals to complete their complex life cycles.Read moreRead less
Australian Laureate Fellowships - Grant ID: FL110100044
Funder
Australian Research Council
Funding Amount
$3,001,626.00
Summary
Origin, evolution and roles of cardinal genomic features underpinning animal multicellular complexity. As the first genome project from our oceans, the sea sponge Amphimedon heralds a new era of marine science for Australia. Using post-genomic approaches, this project will show how studying marine organisms can produce the most fundamental insights into not only multicellular life but also into human diseases and cancer that originally evolved from our oceans.
The evolution of insect genitalia: phallic reversal in Australian praying mantids. This project will enhance our knowledge of the evolutionary processes that drive biodiversity within species and speciation itself. These issues are fundamental to evolutionary biology, and are of great interest for the general public. We have been extraordinarily successful in communicating our research to the public via natural history articles and films. We will continue to generate high impact publications fro ....The evolution of insect genitalia: phallic reversal in Australian praying mantids. This project will enhance our knowledge of the evolutionary processes that drive biodiversity within species and speciation itself. These issues are fundamental to evolutionary biology, and are of great interest for the general public. We have been extraordinarily successful in communicating our research to the public via natural history articles and films. We will continue to generate high impact publications from this research that will increase the international research profile of Australia in the scientific community. This project will establish international collaborations between Australia and the University of Exeter in Cornwall (UK) and provide employment and high quality training to a research associate and a research assistant. Read moreRead less
The evolution of periodic ventilation in insects. The primary outcome of this research initiative is a new approach to the understanding of the evolution of periodic ventilation in insects. It involves researchers from four Australian universities, and will showcase the strength of Australian research and the diversity of the Australian insect fauna, and demonstrate the utility of the Australian environment as a model system for the study of fundamental biological problems. The research deals wi ....The evolution of periodic ventilation in insects. The primary outcome of this research initiative is a new approach to the understanding of the evolution of periodic ventilation in insects. It involves researchers from four Australian universities, and will showcase the strength of Australian research and the diversity of the Australian insect fauna, and demonstrate the utility of the Australian environment as a model system for the study of fundamental biological problems. The research deals with the influence of microclimate on the physiology of insects. This will lead to an appreciation of the ability of these species to respond to climate change.Read moreRead less
Origins of Parasitism in the Psocodea (Insecta). The Psocodea has 2 groups: the lice and the psocopterans (the psocids and their kin). The lice are parasites whereas the psocopterans are free-living. The Psocodea are a unique model-system that will allow us to discover the processes that preadapt arthropods for parasitism and the processes that facilitate "explosive" radiations of arthropods once they become parasites. We will infer evolutionary trees for these insects from 3 genes. Then we ....Origins of Parasitism in the Psocodea (Insecta). The Psocodea has 2 groups: the lice and the psocopterans (the psocids and their kin). The lice are parasites whereas the psocopterans are free-living. The Psocodea are a unique model-system that will allow us to discover the processes that preadapt arthropods for parasitism and the processes that facilitate "explosive" radiations of arthropods once they become parasites. We will infer evolutionary trees for these insects from 3 genes. Then we will use these trees to track the evolution of feeding, attachment, senses and reproduction through evolutionary time. Our work should provide unprecedented insight into the evolution of parasitism in the arthropods.Read moreRead less
Evolution of the biofabrication of mineralized structures in animals. Shells and skeletons are produced by a wide range of animals. These highly-order crystalline structures are genetically-encoded and produce high-performance composite materials that exceed present capabilities in human engineering. This international collaboration will elucidate the molecular mechanisms controlling the fabrication of these architectures. This knowledge will contribute significantly to the development of materi ....Evolution of the biofabrication of mineralized structures in animals. Shells and skeletons are produced by a wide range of animals. These highly-order crystalline structures are genetically-encoded and produce high-performance composite materials that exceed present capabilities in human engineering. This international collaboration will elucidate the molecular mechanisms controlling the fabrication of these architectures. This knowledge will contribute significantly to the development of materials for advanced electronics and energy transducers, human bone therapeutics and marine-based products such as pearls and cements, through the identification of genes underlying biofabrication networks and the development of in vitro bioproduction systems.Read moreRead less