The sparrows in the mining towns: a century of adaptation to contamination. Our research will characterise how contamination from the extraction of precious metals can spread through the environment and how it effects a highly urbanised bird – the house sparrow. In many cases, populations of these birds have been intimately associated with mining operations for over a century, and our recent work has provided evidence of adaptation over time. House sparrows provide a great natural system to unde ....The sparrows in the mining towns: a century of adaptation to contamination. Our research will characterise how contamination from the extraction of precious metals can spread through the environment and how it effects a highly urbanised bird – the house sparrow. In many cases, populations of these birds have been intimately associated with mining operations for over a century, and our recent work has provided evidence of adaptation over time. House sparrows provide a great natural system to understand the genetic potential of organisms to adapt to anthropomorphic change in the environment connected with the resources industry. Our work, will bring new insight into the future management of environmental contamination, and the mitigation of adverse effects arising from resource extraction.Read moreRead less
Watching evolution in action using transitional forms of lizard pregnancy. By using newly developed epigenomic techniques and two Australian lizards that exhibit egg-laying, pregnancy and a rare transitional form of reproduction, this Project aims to watch “evolution in action” to determine how genetic changes enable the evolution of complex traits. The expected outcomes are a new synthesis of how genomic architecture underpins the transition from egg-laying to live-birth, and the first computat ....Watching evolution in action using transitional forms of lizard pregnancy. By using newly developed epigenomic techniques and two Australian lizards that exhibit egg-laying, pregnancy and a rare transitional form of reproduction, this Project aims to watch “evolution in action” to determine how genetic changes enable the evolution of complex traits. The expected outcomes are a new synthesis of how genomic architecture underpins the transition from egg-laying to live-birth, and the first computational model illustrating how transitional reproductive forms are maintained. The benefits include development of Australian expertise in state-of-the-art technologies, new international collaborations between the University of Sydney and Harvard, and significantly enhanced knowledge of vertebrate evolution and diversity.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE220100466
Funder
Australian Research Council
Funding Amount
$462,647.00
Summary
Mito-nuclear coevolution as an engine of biodiversity. This project aims to advance understanding of the processes that drive speciation and generate biodiversity. It will use Australia’s native social bees to test whether genetic diversity in mitochondrial genomes drives biodiversity at the population level, combining molecular and field studies in this uniquely tractable natural system. The expected outcome is a significant advance in knowledge of how coevolution between the two genomes of euk ....Mito-nuclear coevolution as an engine of biodiversity. This project aims to advance understanding of the processes that drive speciation and generate biodiversity. It will use Australia’s native social bees to test whether genetic diversity in mitochondrial genomes drives biodiversity at the population level, combining molecular and field studies in this uniquely tractable natural system. The expected outcome is a significant advance in knowledge of how coevolution between the two genomes of eukaryotic cells - mitochondrial and nuclear - affect the observable diversity of the natural world. The project is also expected to benefit the management and conservation of Australian native bees, which are vital pollinators in our natural and agro-ecosystems. Read moreRead less
Biological diversification across Australia in space and time. This project aims to address fundamental questions about the diversification of Australian species and to have practical and impactful outcomes. It will leverage previous ARC funded research on the phylogenomics of Australian reptiles and amphibians and apply sophisticated analytical tools for quantifying and evaluating biological diversity in multiple dimensions and in a phylogenetic context. The expected outcomes include a publicly ....Biological diversification across Australia in space and time. This project aims to address fundamental questions about the diversification of Australian species and to have practical and impactful outcomes. It will leverage previous ARC funded research on the phylogenomics of Australian reptiles and amphibians and apply sophisticated analytical tools for quantifying and evaluating biological diversity in multiple dimensions and in a phylogenetic context. The expected outcomes include a publicly accessible comprehensive database that will be integrated with the Atlas of Living Australia and rigorous testing of a series of hypotheses concerning how old and recent Australian groups evolved in response to biotic invasions and climate change. Read moreRead less
Evolving rates: foundations for the next generation of molecular clocks. This project aims to investigate the causes and consequences of variation in rate of DNA sequence evolution across three kingdoms of life. Dates estimated from DNA sequences have a wide range of applications, including evolutionary biology, conservation prioritisation and epidemiology. These methods rely on accurate rate estimates, but current models lack information about the biological drivers of rates of genomic change. ....Evolving rates: foundations for the next generation of molecular clocks. This project aims to investigate the causes and consequences of variation in rate of DNA sequence evolution across three kingdoms of life. Dates estimated from DNA sequences have a wide range of applications, including evolutionary biology, conservation prioritisation and epidemiology. These methods rely on accurate rate estimates, but current models lack information about the biological drivers of rates of genomic change. This project will test reliability of current methods, identify potentially misleading estimates of disease origin or conservation priorities, and develop new approaches with empirically-informed models of rate change.Read moreRead less
Skin Microbes and Animal Health: Understanding the Ecological Context. This project aims to understand the fundamental ecological relationships between animal hosts (frogs, geckos) and bacteria on their skin by separating host effects from environmental factors that determine skin microbiome composition. The research is significant because it will generate new knowledge needed to understand how skin microbes function in providing protection against disease. Expected outcomes include the provisio ....Skin Microbes and Animal Health: Understanding the Ecological Context. This project aims to understand the fundamental ecological relationships between animal hosts (frogs, geckos) and bacteria on their skin by separating host effects from environmental factors that determine skin microbiome composition. The research is significant because it will generate new knowledge needed to understand how skin microbes function in providing protection against disease. Expected outcomes include the provision of essential information that will guide future research efforts on the factors that determine a healthy skin microbial community (which is needed before skin diseases can be combated). The research will provide significant benefits, including more targeted conservation efforts to combat wildlife skin diseases.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE190100491
Funder
Australian Research Council
Funding Amount
$418,386.00
Summary
Linking genomic changes to the generation of biodiversity. This project aims to provide a suite of theories, methods and software to enhance our understanding on how the generation of variation at molecular level is linked to the generation of species richness at lineage level. This new approach tests various ways that molecular changes are manifested as patterns of diversification, as revealed by genomic data analysed at the lineage level in phylogenetic studies. Expected outcomes of this proje ....Linking genomic changes to the generation of biodiversity. This project aims to provide a suite of theories, methods and software to enhance our understanding on how the generation of variation at molecular level is linked to the generation of species richness at lineage level. This new approach tests various ways that molecular changes are manifested as patterns of diversification, as revealed by genomic data analysed at the lineage level in phylogenetic studies. Expected outcomes of this project add to a growing body of evolutionary theory and provide practical phylogenetic tools for future analyses. These should benefit Australia by improving our understanding on the formation of Australia’s biodiversity hotspots.Read moreRead less
Computing the climate-life history nexus for Australia's fauna. Life histories are the trajectories organisms follow as they develop, grow, reproduce and age; they are shaped by evolution and limited by the physical and biological environment. Recent breakthroughs by the CI allow the computation of life histories in any sequence of climatic environments, with demonstrated potential to gain new insights into the past, present and future responses of species to climate variability and change. This ....Computing the climate-life history nexus for Australia's fauna. Life histories are the trajectories organisms follow as they develop, grow, reproduce and age; they are shaped by evolution and limited by the physical and biological environment. Recent breakthroughs by the CI allow the computation of life histories in any sequence of climatic environments, with demonstrated potential to gain new insights into the past, present and future responses of species to climate variability and change. This project aims to apply the new methods to understand how species' life histories have adapted to Australia's unique physical conditions and predict how they will respond to future conditions. It will simultaneously lay the foundations for a long-term, open-access research program on species' climate responses.Read moreRead less
Coevolution of sundew bugs and sundews. This project aims to conduct a study of insect-plant interactions to determine if insects and plants coevolve or if they diversify by other evolutionary processes. Insect-plant coevolution is a hotly contested field in evolutionary biology. In Australia, a remarkable interaction exists between carnivorous plants and a group of bugs that steal the plant’s prey. This system offers a great opportunity to test competing coevolutionary theories through a combin ....Coevolution of sundew bugs and sundews. This project aims to conduct a study of insect-plant interactions to determine if insects and plants coevolve or if they diversify by other evolutionary processes. Insect-plant coevolution is a hotly contested field in evolutionary biology. In Australia, a remarkable interaction exists between carnivorous plants and a group of bugs that steal the plant’s prey. This system offers a great opportunity to test competing coevolutionary theories through a combination of historical and ecological approaches. The project expects to showcase the evolution and uniqueness of Australia’s native biota.Read moreRead less
Growing up to be supersonic: bat echolocation origins and mechanics. This project aims to address the unresolved evolutionary origins of bat echolocation. Using a unique combination of development, evolution and novel engineering testing, this project expects to generate new insights into how features of the skull have evolved to allow bats to use their senses to interact with the environment. Expected outcomes include the identification of skull features that are unique to echolocating bats and ....Growing up to be supersonic: bat echolocation origins and mechanics. This project aims to address the unresolved evolutionary origins of bat echolocation. Using a unique combination of development, evolution and novel engineering testing, this project expects to generate new insights into how features of the skull have evolved to allow bats to use their senses to interact with the environment. Expected outcomes include the identification of skull features that are unique to echolocating bats and tests of how these relate to the frequency and detection range of sounds produced. Benefits include improved conservation planning for urban and rural bat populations, and potential commercial advances through engineering applications that mimic the biological process of echolocation. Read moreRead less