A novel microbial process breaking through the nitrogen cycling. Nitrogen transformation is central to life on Earth. This project will challenge a century-old paradigm that microorganisms must cooperate in a team to convert nitrogen from organic- to inorganic forms. We will carry out the first-ever systematic investigation of a novel process, where a single organism mediates complete ammonification and ammonia oxidation, directly connecting organic- and inorganic nitrogen. By revealing metaboli ....A novel microbial process breaking through the nitrogen cycling. Nitrogen transformation is central to life on Earth. This project will challenge a century-old paradigm that microorganisms must cooperate in a team to convert nitrogen from organic- to inorganic forms. We will carry out the first-ever systematic investigation of a novel process, where a single organism mediates complete ammonification and ammonia oxidation, directly connecting organic- and inorganic nitrogen. By revealing metabolic pathways, characterising ecophysiological properties, isolating key microorganisms and exploring their application potential, this project will change our fundamental understanding of global nitrogen cycling, improve the sustainability of water management, and contribute to the circular economy transitionRead moreRead less
Global integration of microbial community and climate data. Microbial communities in the environment control the cycling of carbon and nutrients on Earth, but climate models do not directly incorporate microbial inputs. This interdisciplinary project will link planetary-scale climate modelling data with novel large-scale microbial community analysis, using climate information to provide insight into the fantastic diversity of microbial processes on our planet. The interdisciplinary approach will ....Global integration of microbial community and climate data. Microbial communities in the environment control the cycling of carbon and nutrients on Earth, but climate models do not directly incorporate microbial inputs. This interdisciplinary project will link planetary-scale climate modelling data with novel large-scale microbial community analysis, using climate information to provide insight into the fantastic diversity of microbial processes on our planet. The interdisciplinary approach will inform the next generation of climate models and better predict our future climate’s feedbacks. Conversely, it will make progress on the grand challenge of understanding microbial community function by enabling microbial ecology to be treated as a data-intensive machine learning problem.Read moreRead less
Mechanisms of virus transport in indoor environments. The socio-economic benefits to Australia from the project will include the developed and validated model for quantification of virus spread and survival through aerosolation processes, which will become an important tool for: (i) prediction of the pathways of virus spread in indoor environment, and (ii) developing future directions for management and control for prevention or minimization the likelihood of human infections. The ultimate econo ....Mechanisms of virus transport in indoor environments. The socio-economic benefits to Australia from the project will include the developed and validated model for quantification of virus spread and survival through aerosolation processes, which will become an important tool for: (i) prediction of the pathways of virus spread in indoor environment, and (ii) developing future directions for management and control for prevention or minimization the likelihood of human infections. The ultimate economic benefit of this research will be reduction in health care costs and lost productivity. The research will also place Australia in the forefront of international progress and race towards toward better methods for virus spread prevention. Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE120101213
Funder
Australian Research Council
Funding Amount
$375,000.00
Summary
Microbial buffering: protecting the Great Barrier Reef against anthropogenic impacts. Coral reefs are hotspots of diversity, but are susceptible to human activities such as agriculture and tourism. Novel molecular approaches will be used to characterise what microorganisms are found at polluted and non-polluted sites of the Great Barrier Reef lagoon and what metabolic pathways they use to protect it against human impacts.
Discovery Early Career Researcher Award - Grant ID: DE240100842
Funder
Australian Research Council
Funding Amount
$455,057.00
Summary
Roles of emerging pollutants in spreading antimicrobial resistance. Antimicrobial resistance is a growing global challenge, yet the impact of environmental agents on the spread of antimicrobial resistance is poorly understood. Drawing on my recent findings and a tight integration of a model microbial ecology system, this project aims to investigate the impact of environmental pollutants on the colonisation and spread of antimicrobial resistance in situ ecological communities. This project expect ....Roles of emerging pollutants in spreading antimicrobial resistance. Antimicrobial resistance is a growing global challenge, yet the impact of environmental agents on the spread of antimicrobial resistance is poorly understood. Drawing on my recent findings and a tight integration of a model microbial ecology system, this project aims to investigate the impact of environmental pollutants on the colonisation and spread of antimicrobial resistance in situ ecological communities. This project expects to generate new knowledge at the forefront of research into antimicrobial resistance in a complex ecosystem. The outcomes should provide a deep mechanistic understanding of environmental factors associated with antimicrobial resistance, with applications to antimicrobial resistance risk management for One Health.Read moreRead less
The only constant is change: ecology and evolution of phage-host interactions in a model ecosystem. Microorganisms underpin life on Earth, but our understanding of their diversity and activity is limited by our inability to grow most of them in the laboratory. Recently, new techniques have emerged that allow access to the genetic information of all microorganisms by directly sequencing DNA and RNA from the environment. In this research we will further develop these frontier technologies, promoti ....The only constant is change: ecology and evolution of phage-host interactions in a model ecosystem. Microorganisms underpin life on Earth, but our understanding of their diversity and activity is limited by our inability to grow most of them in the laboratory. Recently, new techniques have emerged that allow access to the genetic information of all microorganisms by directly sequencing DNA and RNA from the environment. In this research we will further develop these frontier technologies, promoting this new area of science in Australia. We will apply these techniques to microbial communities involved in wastewater treatment in order to understand the interactions between microorganisms and the viruses that infect them. Understanding this interaction will have important implications for optimising these treatment processes.Read moreRead less
Microbial Ecology and Control of Foaming in Anaerobic Digesters. One of the world's most common treatments of biosolids (product of wastewater treatment), anaerobic digestion often suffers from accumulation of biological foam. This foam hinders treatment, personnel health and safety, legal requirements for environmental protection are jeopardised and attempts to control digester foaming are costly. There is a clear lack of knowledge about the organisms involved and causes, therefore no informe ....Microbial Ecology and Control of Foaming in Anaerobic Digesters. One of the world's most common treatments of biosolids (product of wastewater treatment), anaerobic digestion often suffers from accumulation of biological foam. This foam hinders treatment, personnel health and safety, legal requirements for environmental protection are jeopardised and attempts to control digester foaming are costly. There is a clear lack of knowledge about the organisms involved and causes, therefore no informed solutions exist. Molecular DNA techniques, 16SrDNA sequencing and DGGE, will assist in deciphering causes and organisms involved. Research outcomes will present environmental, legal and economical acceptable control strategies for digester foaming to the waste management and water industries.Read moreRead less
Why certain viruses don't get along in mosquitoes. The molecular mechanism. The overall goal of this project is to obtain an understanding of how certain insect-only viruses make mosquitoes incapable of transmitting diseases. These viruses, called insect-specific flaviviruses, can be employed as biocontrol agents for mosquito-borne human and veterinary diseases. However as it is currently unknown how exactly they affect mosquitoes, the safety and efficacy of their use can't be predicted. The pro ....Why certain viruses don't get along in mosquitoes. The molecular mechanism. The overall goal of this project is to obtain an understanding of how certain insect-only viruses make mosquitoes incapable of transmitting diseases. These viruses, called insect-specific flaviviruses, can be employed as biocontrol agents for mosquito-borne human and veterinary diseases. However as it is currently unknown how exactly they affect mosquitoes, the safety and efficacy of their use can't be predicted. The proposed project will dissect the very intricate mechanisms of interactions between insect-specific flaviviruses and mosquitoes and explain how exactly they prevent disease transmission. It should generate novel fundamental knowledge, implement innovative methodologies and provide training for students and junior scientist. Read moreRead less
Defining how inter-bacterial symbioses regulate aquatic ecosystem health. This project will determine how ecological relationships among aquatic bacteria govern the health of Australia’s marine and freshwater environments. Cyanobacteria support aquatic ecosystem productivity, but can have detrimental effects when they form harmful blooms, although the factors governing the balance of these contrasting impacts are largely undefined. By coupling sophisticated approaches including genomics, phenomi ....Defining how inter-bacterial symbioses regulate aquatic ecosystem health. This project will determine how ecological relationships among aquatic bacteria govern the health of Australia’s marine and freshwater environments. Cyanobacteria support aquatic ecosystem productivity, but can have detrimental effects when they form harmful blooms, although the factors governing the balance of these contrasting impacts are largely undefined. By coupling sophisticated approaches including genomics, phenomics, and microfluidics to examine how symbioses with other bacteria influence the growth and function of important species of cyanobacteria, this research will elucidate the importance of an over-looked factor in controlling the productivity, health and value of Australia’s aquatic estate.Read moreRead less
From shape to function: how structured RNA defines insect flaviviruses. The goal of this project is to obtain an understanding of how insect-specific flaviviruses (ISFs) utilise viral noncoding RNAs to enable their replication in mosquitoes. These viruses only replicate in mosquitoes, and not in humans or animals. They can be employed as the biocontrol agents for mosquito-borne diseases as they make mosquitoes incapable of disease transmission. However, it is currently unknown how exactly insect ....From shape to function: how structured RNA defines insect flaviviruses. The goal of this project is to obtain an understanding of how insect-specific flaviviruses (ISFs) utilise viral noncoding RNAs to enable their replication in mosquitoes. These viruses only replicate in mosquitoes, and not in humans or animals. They can be employed as the biocontrol agents for mosquito-borne diseases as they make mosquitoes incapable of disease transmission. However, it is currently unknown how exactly insect-specific flaviviruses affect mosquitoes and this information is vital for informed design of ISF-based interventions. The project will generate new knowledge on functions of noncoding RNAs in ISFs that are hypothesised to have immunomodulatory role in mosquitoes. It will also train students and ECRs.Read moreRead less