Detection and viability of waterborne pathogens using a gut-on-chip. This project aims to resolve a significant problem for water utilities. Microbial pathogens Cryptosporidium, norovirus and adenovirus are the main public health concern for drinking water in developed nations. Water monitoring is limited by the lack of fast, reliable detection methods and viability assays for these pathogens. This project will use a novel gut-on-a-chip to develop for the first time rapid infectivity assays for ....Detection and viability of waterborne pathogens using a gut-on-chip. This project aims to resolve a significant problem for water utilities. Microbial pathogens Cryptosporidium, norovirus and adenovirus are the main public health concern for drinking water in developed nations. Water monitoring is limited by the lack of fast, reliable detection methods and viability assays for these pathogens. This project will use a novel gut-on-a-chip to develop for the first time rapid infectivity assays for Cryptosporidium, norovirus and adenovirus. Significant benefits include improved diagnostics and water disinfection assays, improved water treatment and reduced costs with global impact.Read moreRead less
Detection and elimination of resting spores of Olpidium vectoring lettuce big-vein disease in lettuce seedling nursery production. This project will devise nucleic acid and serology methods for detection of Olpidium brassicae, vector of lettuce big-vein disease (LBVD), during various phases of lettuce seedling production in nursery environments. It will be the first study to develop sustainable and environmentally responsible nursery best-practice protocols for integrated management of O. brass ....Detection and elimination of resting spores of Olpidium vectoring lettuce big-vein disease in lettuce seedling nursery production. This project will devise nucleic acid and serology methods for detection of Olpidium brassicae, vector of lettuce big-vein disease (LBVD), during various phases of lettuce seedling production in nursery environments. It will be the first study to develop sustainable and environmentally responsible nursery best-practice protocols for integrated management of O. brassicae in routine seedling production and for management within the lettuce industry. These protocols will ensure that the spread of LBVD from contaminated lettuce nurseries to farms is prevented. It will also be a unique study of the establishment of a disease in new land with different soils and agricultural practices.Read moreRead less
Validating protozoa-specific drug targets using peptides from biodiverse gene fragment libraries. Cryptosporidium and the trypanosomes are protozoan parasites, which have a global impact on the health, survival and economic development of millions of people and animals world wide. New therapies for the diseases they cause are urgently required. We describe a novel means of identifying protozoa-specific peptides that will inhibit the formation of essential protein complexes, which have no effect ....Validating protozoa-specific drug targets using peptides from biodiverse gene fragment libraries. Cryptosporidium and the trypanosomes are protozoan parasites, which have a global impact on the health, survival and economic development of millions of people and animals world wide. New therapies for the diseases they cause are urgently required. We describe a novel means of identifying protozoa-specific peptides that will inhibit the formation of essential protein complexes, which have no effect on the mammalian host. Candidate peptides will then be used to validate these protein complexes as new targets for the development of peptide-based therapeutic compounds. This project will validate novel targets for the development of new treatments for these diseases.Read moreRead less
Evolution of diverse symbiotic phenotypes among native soil bacteria following spread of a genomic island from a rhizobial inoculant. The quality of legume protein depends on symbiotic nitrogen fixation by root nodule bacteria (RNB). Sustainable legume production in Australian agriculture depends on legume inoculation with effective strains of these bacteria. Unfortunately inoculant strains transfer DNA to other soil bacteria resulting in soil populations of RNB that compete for nodulation but a ....Evolution of diverse symbiotic phenotypes among native soil bacteria following spread of a genomic island from a rhizobial inoculant. The quality of legume protein depends on symbiotic nitrogen fixation by root nodule bacteria (RNB). Sustainable legume production in Australian agriculture depends on legume inoculation with effective strains of these bacteria. Unfortunately inoculant strains transfer DNA to other soil bacteria resulting in soil populations of RNB that compete for nodulation but are less effective in nitrogen fixation. This transfer of DNA threatens a $2 billion asset in Australian agriculture. We will use molecular microbial ecology to investigate the mechanisms of genetic transfer of symbiotic DNA in RNB, and use this knowledge to prevent it.Read moreRead less
Predictive Models & Decision Support Systems for Virus Diseases and Aphid Vectors of Lupin and Canola. Aphids and the viruses they transmit cause major economic losses in legume and canola crops in Australia. This project will develop innovative predictive models and decision support systems (DSS's) for Beet western yellows virus and direct aphid feeding damage in canola and two types of Bean yellow mosaic virus in lupin, and a DSS for direct aphid feeding damage in lupin. These models will gr ....Predictive Models & Decision Support Systems for Virus Diseases and Aphid Vectors of Lupin and Canola. Aphids and the viruses they transmit cause major economic losses in legume and canola crops in Australia. This project will develop innovative predictive models and decision support systems (DSS's) for Beet western yellows virus and direct aphid feeding damage in canola and two types of Bean yellow mosaic virus in lupin, and a DSS for direct aphid feeding damage in lupin. These models will greatly improve understanding of factors driving virus epidemics and aphid outbreaks. Following extensive validation with data previously collected in the WA grainbelt, the predictive models and DSS's will be extended to end-users, resulting in considerable productivity gains, reduced costs and environmental benefits.Read moreRead less
Novel strategy for optimising fertilizer input coupled with organic residue management for sustainable reconstruction of jarrah forest ecosystem. This project is aimed at judicious management of the rehabilitation process following surface mining by reducing initial fertilizer input along with using organic residue accumulated following pre-mine clearing of vegetation. This approach has the potential for 'speeding-up' the ecosystem development process by initiating early microbial development in ....Novel strategy for optimising fertilizer input coupled with organic residue management for sustainable reconstruction of jarrah forest ecosystem. This project is aimed at judicious management of the rehabilitation process following surface mining by reducing initial fertilizer input along with using organic residue accumulated following pre-mine clearing of vegetation. This approach has the potential for 'speeding-up' the ecosystem development process by initiating early microbial development in rehabilitation practice and reducing the deleterious effect of heavy fertilization. Apart from these ecological advantages, reducing fertilizer application lowers minesite rehabilitation cost incurred by mining companies. This project will be the first attempt to use organic residue and streamlining the use of mineral fertilizers in mine rehabilitation practice.Read moreRead less
Risks to human health and the ecosystem from feral pigs in Perth metropolitan water catchments. This project aims to investigate the potential risk feral pigs pose to public health through the dissemination of water borne pathogens within water catchment areas, and to investigate their role in the maintenance and spread of diseases of public and animal health concern in the south west of Western Australia. As well as providing a frontline approach to protecting our water supplies, this project ....Risks to human health and the ecosystem from feral pigs in Perth metropolitan water catchments. This project aims to investigate the potential risk feral pigs pose to public health through the dissemination of water borne pathogens within water catchment areas, and to investigate their role in the maintenance and spread of diseases of public and animal health concern in the south west of Western Australia. As well as providing a frontline approach to protecting our water supplies, this project will also provide valuable data on the nature and extent of the risk feral pigs pose to biodiversity conservation and the environment generally. The outcomes of this research will provide a scientific basis for the development of prioritised strategies for the control of feral pigs in Western Australia.Read moreRead less
The adaptive evolution of key methane-utilising microorganisms. This project aims to characterise the evolutionary adaptations of a group of microorganisms with a key role in mitigating the release of methane into the atmosphere. Innovative molecular and visualisation-based approaches will be applied to uncover their metabolic diversity and evolutionary history. An important outcome of this study will be the comprehensive understanding of the contribution and impact these microorganisms have on ....The adaptive evolution of key methane-utilising microorganisms. This project aims to characterise the evolutionary adaptations of a group of microorganisms with a key role in mitigating the release of methane into the atmosphere. Innovative molecular and visualisation-based approaches will be applied to uncover their metabolic diversity and evolutionary history. An important outcome of this study will be the comprehensive understanding of the contribution and impact these microorganisms have on the global carbon cycle, which will importantly inform accurate climate change models. This has clear benefits for society, given the precision of such models is essential in our ability to minimise the impact and associated cost of global warming.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE240100388
Funder
Australian Research Council
Funding Amount
$437,977.00
Summary
Ecological and phylogenomic insights into infectious diseases in animals. This project aims to address major knowledge gaps in our understanding of Clostridium difficile, a leading cause of severe gastrointestinal disease in animals. The project is expected to define the epidemiology of C. difficile infection in Australian horses, characterise the genetic and phenotypic traits of C. difficile strains causing equine disease and develop a new tool for enhanced genomic tracking of C. difficile in a ....Ecological and phylogenomic insights into infectious diseases in animals. This project aims to address major knowledge gaps in our understanding of Clostridium difficile, a leading cause of severe gastrointestinal disease in animals. The project is expected to define the epidemiology of C. difficile infection in Australian horses, characterise the genetic and phenotypic traits of C. difficile strains causing equine disease and develop a new tool for enhanced genomic tracking of C. difficile in animals. These outcomes will support strategies by the veterinary sector to improve the detection, prevention and control of C. difficile infections in animals, providing long-term socio-economic benefits arising from reduced incidence and mortality associated with C. difficile infections in Australian horses and livestock.Read moreRead less
Harnessing horizontal gene transfer for sustainable nitrogen fixation. This project aims to investigate natural deoxyribonucleic acid (DNA) transfer from nitrogen-fixing bacteria to indigenous bacteria in Australian soils. This project expects to significantly expand our understanding of the molecular and genetic factors contributing to the evolution of ineffective symbiotic bacteria in these soils. An expected outcome of this project is support development of genetically stable bacterial inocul ....Harnessing horizontal gene transfer for sustainable nitrogen fixation. This project aims to investigate natural deoxyribonucleic acid (DNA) transfer from nitrogen-fixing bacteria to indigenous bacteria in Australian soils. This project expects to significantly expand our understanding of the molecular and genetic factors contributing to the evolution of ineffective symbiotic bacteria in these soils. An expected outcome of this project is support development of genetically stable bacterial inoculants for use in agriculture. Inoculation of legumes with nitrogen-fixing symbiotic bacteria is a cheap and environmentally-friendly alternative to chemical fertilisers and contributes $3-4 billion per annum to Australian economy.Read moreRead less