LATERAL GENE TRANSFER, GENOME EVOLUTION AND THE EMERGENCE OF NEW DISEASES CAUSED BY FUNGAL PATHOGENS IN THE PLEOSPORALES. Normal evolution involves the transfer of genes within species. The modest variation between progeny powers natural selection. Lateral gene transfer is the movement of genetic material between species. It allows for large evolutionary steps. Although common in bacteria, it has rarely been described convincingly in higher organisms such as fungi, plants or animals. We have evi ....LATERAL GENE TRANSFER, GENOME EVOLUTION AND THE EMERGENCE OF NEW DISEASES CAUSED BY FUNGAL PATHOGENS IN THE PLEOSPORALES. Normal evolution involves the transfer of genes within species. The modest variation between progeny powers natural selection. Lateral gene transfer is the movement of genetic material between species. It allows for large evolutionary steps. Although common in bacteria, it has rarely been described convincingly in higher organisms such as fungi, plants or animals. We have evidence that one group of fungal pathogens is particularly adept at acquiring new genes that enable them to cause new diseases. We will determine the mechanism and frequency of gene transfer in this group. The work had fundamental significance in evolutionary biology, in the emergence of new diseases and in the use of genetically-modified organisms.Read moreRead less
Isolation and functional characterisation of a pathogen meta effector able to inhibit detection of multiple disease effectors by resistant plants. The rust fungi are a major economic threat to crop production in Australia. This project will investigate the molecular mechanism used by a rust fungus to prevent detection of multiple disease-inducing proteins by resistant plants and generate knowledge that will lead to the development of new and more effective disease control strategies.
Finding the missing links in salt and water transport in plants. Grain crops and horticultural plants use proteins called aquaporins to move water across cell membranes, but a group of these proteins can also transport some important nutrient ions as well as toxic sodium ions. This project aims to reveal the molecular pathways that regulate water and ion transport via aquaporins using advanced techniques in biophysics and molecular biology. These results will provide novel insights into how plan ....Finding the missing links in salt and water transport in plants. Grain crops and horticultural plants use proteins called aquaporins to move water across cell membranes, but a group of these proteins can also transport some important nutrient ions as well as toxic sodium ions. This project aims to reveal the molecular pathways that regulate water and ion transport via aquaporins using advanced techniques in biophysics and molecular biology. These results will provide novel insights into how plants coordinate and adapt to changing water and salt conditions, addressing a missing link in how ions and water move in and out of plant vacuoles. Benefits include an expanded, innovative range of targets for plant breeding programs to improve plant productivity in our changing climate.Read moreRead less
How SEP-like genes determine cereal inflorescence architecture. This project aims to understand the morphological diversity of inflorescence architecture between cereal crop species. To do so, this project will identify functions and analyse the regulatory networks of conserved SEPALLATA genes (SEPs). This will enable them to determine cereal inflorescence morphogenesis of rice (branching) and barley (non-branching), representing the most important cereals. Identifying and understanding rice and ....How SEP-like genes determine cereal inflorescence architecture. This project aims to understand the morphological diversity of inflorescence architecture between cereal crop species. To do so, this project will identify functions and analyse the regulatory networks of conserved SEPALLATA genes (SEPs). This will enable them to determine cereal inflorescence morphogenesis of rice (branching) and barley (non-branching), representing the most important cereals. Identifying and understanding rice and barley SEPs, their direct targets and interactors, and how they regulate inflorescence branches and spikelets in both species is expected to provide evolutionary and developmental insights and targets to improve for crop yield. A molecular understanding of the regulatory network that underpins inflorescence shape and grain number will advance fundamental biology, and could form the basis for significant yield improvements by manipulating key points in the developmental pathway.Read moreRead less
Protecting cereal grain development at high temperatures. This project aims to investigate new temperature-responsive factors that regulate cereal grain development to protect grain production under heat stress. The new research will leverage international collaborations with access to cutting-edge genetic and technological resources, and refine novel X-ray imaging techniques in Australia, to observe how temperature affects flower structure and function in barley and rice. Favourable mutations t ....Protecting cereal grain development at high temperatures. This project aims to investigate new temperature-responsive factors that regulate cereal grain development to protect grain production under heat stress. The new research will leverage international collaborations with access to cutting-edge genetic and technological resources, and refine novel X-ray imaging techniques in Australia, to observe how temperature affects flower structure and function in barley and rice. Favourable mutations that optimise plant yield and fitness will be defined and explored in other, more complex, cereals such as wheat. Expected outcomes will be fundamental breakthroughs in understanding how plants respond to, and buffer, the effects of heat to lead to translational breeding strategies that bolster grain yield.Read moreRead less
Molecular basis of rust infection and host plant resistance. Plant diseases threaten agricultural productivity in Australia, with rust fungi being a major problem for cereal grain production. This project will investigate molecular processes underlying the infection of plants by rust fungi and will provide basic knowledge for development of novel and durable disease resistance strategies.
The genetic and molecular organisation of the self incompatibility gene region in the grasses. Self-incompatibility (SI) is a cell-cell recognition process used by plants to prevent self-pollination and force outcrossing. It is widespread, occurring in a third of plant families. Although studies of SI go back to the 1800s, the origin of SI remains a mystery. Recent advances in the molecular characterisation of SI loci in some species has re-ignited debate on its origins but has provided few answ ....The genetic and molecular organisation of the self incompatibility gene region in the grasses. Self-incompatibility (SI) is a cell-cell recognition process used by plants to prevent self-pollination and force outcrossing. It is widespread, occurring in a third of plant families. Although studies of SI go back to the 1800s, the origin of SI remains a mystery. Recent advances in the molecular characterisation of SI loci in some species has re-ignited debate on its origins but has provided few answers. This project uses the grasses to explore the origins of SI. As a model system, the grasses offer detailed genetic and molecular data and aspects of floral architecture associated with SI can be investigatedRead moreRead less
How is the plant genome reactivated and controlled during seed germination? This project aims to determine the mechanisms by which plant genomes are regulated during seed germination. The genomes of cells in mature, inactive seeds are repressed, but later must be rapidly reactivated to allow the gene expression that drives early seedling growth and development. This project will study proteins that turn genes on and off, and how these interact with the structure of DNA, in order to understand ho ....How is the plant genome reactivated and controlled during seed germination? This project aims to determine the mechanisms by which plant genomes are regulated during seed germination. The genomes of cells in mature, inactive seeds are repressed, but later must be rapidly reactivated to allow the gene expression that drives early seedling growth and development. This project will study proteins that turn genes on and off, and how these interact with the structure of DNA, in order to understand how spatial and temporal patterns of gene expression are controlled. It will advance our understanding of genome regulatory programs controlling germination and growth, and how they vary between Arabidopsis and barley. This can improve our ability to manipulate seed behaviour which would benefit growers and producers. Read moreRead less
Revealing novel mechanisms conferring evolution of resistance to glufosinate and glyphosate in Eleusine indica. Glyphosate and its alternative glufosinate are the most important herbicides in world agriculture. The world’s first cases of glufosinate resistance in Eleusine indica have been recently reported. The aims of the proposed research is to identify the currently unknown biochemical and molecular mechanisms conferring glufosinate resistance, to unravel the novel molecular mechanism endowin ....Revealing novel mechanisms conferring evolution of resistance to glufosinate and glyphosate in Eleusine indica. Glyphosate and its alternative glufosinate are the most important herbicides in world agriculture. The world’s first cases of glufosinate resistance in Eleusine indica have been recently reported. The aims of the proposed research is to identify the currently unknown biochemical and molecular mechanisms conferring glufosinate resistance, to unravel the novel molecular mechanism endowing very high level glyphosate resistance, and to elucidate the evolutionary trajectory of glyphosate resistance in E. indica. This will advance our current knowledge and understanding of resistance evolution and have impact on resistance management.Read moreRead less
A signalling pathway for future crop improvement. This project aims to decipher a mechanism that controls plant gas exchange – the process that emits oxygen, loses water, absorbs carbon dioxide and is essential for plant growth for food, fibre and fuel production. When plants encounter stressful conditions such as drought, high temperatures or flooding, they adapt their physiology to maintain viability and re-establish growth. This project will manipulate stress-induced gamma-aminobutyric acid’s ....A signalling pathway for future crop improvement. This project aims to decipher a mechanism that controls plant gas exchange – the process that emits oxygen, loses water, absorbs carbon dioxide and is essential for plant growth for food, fibre and fuel production. When plants encounter stressful conditions such as drought, high temperatures or flooding, they adapt their physiology to maintain viability and re-establish growth. This project will manipulate stress-induced gamma-aminobutyric acid’s capacity to control plant gas exchange to help secure future food production, through improving crop tolerance to stresses such as low water availability and high temperatures – conditions associated with a changing Australian climate.Read moreRead less