LATERAL GENE TRANSFER, GENOME EVOLUTION AND THE EMERGENCE OF NEW DISEASES CAUSED BY FUNGAL PATHOGENS IN THE PLEOSPORALES. Normal evolution involves the transfer of genes within species. The modest variation between progeny powers natural selection. Lateral gene transfer is the movement of genetic material between species. It allows for large evolutionary steps. Although common in bacteria, it has rarely been described convincingly in higher organisms such as fungi, plants or animals. We have evi ....LATERAL GENE TRANSFER, GENOME EVOLUTION AND THE EMERGENCE OF NEW DISEASES CAUSED BY FUNGAL PATHOGENS IN THE PLEOSPORALES. Normal evolution involves the transfer of genes within species. The modest variation between progeny powers natural selection. Lateral gene transfer is the movement of genetic material between species. It allows for large evolutionary steps. Although common in bacteria, it has rarely been described convincingly in higher organisms such as fungi, plants or animals. We have evidence that one group of fungal pathogens is particularly adept at acquiring new genes that enable them to cause new diseases. We will determine the mechanism and frequency of gene transfer in this group. The work had fundamental significance in evolutionary biology, in the emergence of new diseases and in the use of genetically-modified organisms.Read moreRead less
Identifying novel salinity tolerance mechanisms by spatial and temporal analysis of lipids in barley. Agrifood production faces the dual challenges of an increasing world population and the threats of abiotic stresses arising from climate change and the erosion of arable land. Cereals, the major food crops, are poorly adapted to tolerate most abiotic stresses, including salinity. This project applies new technologies investigating spatial and temporal biochemical mechanisms a model cereal, Horde ....Identifying novel salinity tolerance mechanisms by spatial and temporal analysis of lipids in barley. Agrifood production faces the dual challenges of an increasing world population and the threats of abiotic stresses arising from climate change and the erosion of arable land. Cereals, the major food crops, are poorly adapted to tolerate most abiotic stresses, including salinity. This project applies new technologies investigating spatial and temporal biochemical mechanisms a model cereal, Hordeum vulgare (barley), utilises to adapt and tolerate salinity. The aims are to investigate the role of specifically plasma membrane lipids modulating either signalling pathways or membrane fluidity that impacts on adaptation during salinity. The results will provide new leads for the development of cereal germplasm with increased salt tolerance.Read moreRead less
Isolation and functional characterisation of a pathogen meta effector able to inhibit detection of multiple disease effectors by resistant plants. The rust fungi are a major economic threat to crop production in Australia. This project will investigate the molecular mechanism used by a rust fungus to prevent detection of multiple disease-inducing proteins by resistant plants and generate knowledge that will lead to the development of new and more effective disease control strategies.
How SEP-like genes determine cereal inflorescence architecture. This project aims to understand the morphological diversity of inflorescence architecture between cereal crop species. To do so, this project will identify functions and analyse the regulatory networks of conserved SEPALLATA genes (SEPs). This will enable them to determine cereal inflorescence morphogenesis of rice (branching) and barley (non-branching), representing the most important cereals. Identifying and understanding rice and ....How SEP-like genes determine cereal inflorescence architecture. This project aims to understand the morphological diversity of inflorescence architecture between cereal crop species. To do so, this project will identify functions and analyse the regulatory networks of conserved SEPALLATA genes (SEPs). This will enable them to determine cereal inflorescence morphogenesis of rice (branching) and barley (non-branching), representing the most important cereals. Identifying and understanding rice and barley SEPs, their direct targets and interactors, and how they regulate inflorescence branches and spikelets in both species is expected to provide evolutionary and developmental insights and targets to improve for crop yield. A molecular understanding of the regulatory network that underpins inflorescence shape and grain number will advance fundamental biology, and could form the basis for significant yield improvements by manipulating key points in the developmental pathway.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE140100575
Funder
Australian Research Council
Funding Amount
$394,575.00
Summary
Getting to the root of salt-tolerance in the model cereal crop, barley. The root system is the first part of the plant to sense high concentrations of sodium and chloride ions in saline soils. The ability of roots to maintain growth in response to salinity is an important adaptation, increasing root soil exploration for nutrient and water uptake. The aim of this project is to identify the molecular mechanisms that control and regulate root growth in response to salinity using barley as a cereal ....Getting to the root of salt-tolerance in the model cereal crop, barley. The root system is the first part of the plant to sense high concentrations of sodium and chloride ions in saline soils. The ability of roots to maintain growth in response to salinity is an important adaptation, increasing root soil exploration for nutrient and water uptake. The aim of this project is to identify the molecular mechanisms that control and regulate root growth in response to salinity using barley as a cereal model. The knowledge gained in barley will provide important information for increasing salinity tolerance in other Australian cereal crops, most notably wheat.Read moreRead less
ARC Centre of Excellence in Plant Cell Wall Biology. The ARC Centre for Plant Cell Wall Biology will define the regulatory mechanisms that control molecular, enzymic and cellular processes involved in the synthesis, deposition, re-modelling and depolymerisation of cell wall polysaccharides of cereals and grasses. Plant cell walls represent the world's largest renewable carbon resource, but the regulatory mechanisms responsible for their synthesis and assembly are not understood. Key distinguishi ....ARC Centre of Excellence in Plant Cell Wall Biology. The ARC Centre for Plant Cell Wall Biology will define the regulatory mechanisms that control molecular, enzymic and cellular processes involved in the synthesis, deposition, re-modelling and depolymerisation of cell wall polysaccharides of cereals and grasses. Plant cell walls represent the world's largest renewable carbon resource, but the regulatory mechanisms responsible for their synthesis and assembly are not understood. Key distinguishing features of the Centre will be the international, integrative, and multidisciplinary approach towards addressing major questions in plant biology, its strategy to leverage ARC funding, and its linkages with potential national and international end-users of the fundamental scientific discoveries.Read moreRead less
ARC Centre of Excellence in Plant Energy Biology. We propose a novel approach to improve sustainable yield by optimising the overall efficiency of energy capture, conversion and use by plants. Efficiency gains in metabolism, transport, and development will be more effective than optimising single nutrient inputs or product outputs. Improving multiple parameters simultaneously is a necessary solution to the increasing demand for more crop yield from finite land, water, and nutrient resources. Unp ....ARC Centre of Excellence in Plant Energy Biology. We propose a novel approach to improve sustainable yield by optimising the overall efficiency of energy capture, conversion and use by plants. Efficiency gains in metabolism, transport, and development will be more effective than optimising single nutrient inputs or product outputs. Improving multiple parameters simultaneously is a necessary solution to the increasing demand for more crop yield from finite land, water, and nutrient resources. Unpredictable environmental challenges adversely affect plant growth and further perturb plant energy balance, limiting yield. The epigenetic controls, gene variants and signals discovered will provide a new basis for sustainable productivity of crops and will future-proof plants in changing climates.Read moreRead less
Molecular basis of rust infection and host plant resistance. Plant diseases threaten agricultural productivity in Australia, with rust fungi being a major problem for cereal grain production. This project will investigate molecular processes underlying the infection of plants by rust fungi and will provide basic knowledge for development of novel and durable disease resistance strategies.
Discovery Early Career Researcher Award - Grant ID: DE150100837
Funder
Australian Research Council
Funding Amount
$354,000.00
Summary
Engineering enzymes controlling plant polysaccharide properties. This project will aim to use data to define how the synthesis and interconversion of nucleotide sugars is regulated and how this controls the properties of arabinoxylan in economically important plants. Dietary consumption of arabinoxylan reduces chronic diseases. Additionally, the attributes of arabinoxylan influence the cost of processing plant biomass. However, genetic control of the properties of the plant polysaccharide arabin ....Engineering enzymes controlling plant polysaccharide properties. This project will aim to use data to define how the synthesis and interconversion of nucleotide sugars is regulated and how this controls the properties of arabinoxylan in economically important plants. Dietary consumption of arabinoxylan reduces chronic diseases. Additionally, the attributes of arabinoxylan influence the cost of processing plant biomass. However, genetic control of the properties of the plant polysaccharide arabinoxylan is unresolved. A major control point in the partitioning of carbon from photosynthesis into arabinoxylan is the activity of sugar nucleotide interconverting enzymes. To characterise these enzymes, genomic, glycomic and enzyme kinetic data will be combined and the target enzymes will be modified in transgenic plants.Read moreRead less
The genetic and molecular organisation of the self incompatibility gene region in the grasses. Self-incompatibility (SI) is a cell-cell recognition process used by plants to prevent self-pollination and force outcrossing. It is widespread, occurring in a third of plant families. Although studies of SI go back to the 1800s, the origin of SI remains a mystery. Recent advances in the molecular characterisation of SI loci in some species has re-ignited debate on its origins but has provided few answ ....The genetic and molecular organisation of the self incompatibility gene region in the grasses. Self-incompatibility (SI) is a cell-cell recognition process used by plants to prevent self-pollination and force outcrossing. It is widespread, occurring in a third of plant families. Although studies of SI go back to the 1800s, the origin of SI remains a mystery. Recent advances in the molecular characterisation of SI loci in some species has re-ignited debate on its origins but has provided few answers. This project uses the grasses to explore the origins of SI. As a model system, the grasses offer detailed genetic and molecular data and aspects of floral architecture associated with SI can be investigatedRead moreRead less