Design of dynamic visual signals. Models of the design of visual signals depend heavily upon analyses of static ornaments. Nothing is known about dynamic visual signals. We will use an array of new techniques to tackle this problem for the first time. Motion analyses will define the task faced by the visual system. Sensory limitations will be measured to identify constraints on signal evolution. Digital video playback studies will assess recognition and explain aspects of signal design. Results ....Design of dynamic visual signals. Models of the design of visual signals depend heavily upon analyses of static ornaments. Nothing is known about dynamic visual signals. We will use an array of new techniques to tackle this problem for the first time. Motion analyses will define the task faced by the visual system. Sensory limitations will be measured to identify constraints on signal evolution. Digital video playback studies will assess recognition and explain aspects of signal design. Results will test the generality of principles that have been developed in studies of female mate choice and extend these ideas to address intra-sexual selection operating through opponent assessment.Read moreRead less
Retracing the Early Evolution of Metazoa using Novel Methods and Strategies. Metazoa is one of the best-characterised groups of species in terms of its morphology, fossil record, development, and genetic make-up, but the phylogeny remains obscure because the fossil record is incomplete and because molecular phylogenetic methods have not yet been developed with the complexity of genomic data in mind. We will develop methods and strategies for the analysis of whole genomes, and use them in studies ....Retracing the Early Evolution of Metazoa using Novel Methods and Strategies. Metazoa is one of the best-characterised groups of species in terms of its morphology, fossil record, development, and genetic make-up, but the phylogeny remains obscure because the fossil record is incomplete and because molecular phylogenetic methods have not yet been developed with the complexity of genomic data in mind. We will develop methods and strategies for the analysis of whole genomes, and use them in studies of the mitochondrial genome. We will infer the animal phylogeny, and use it to chart the evolution of animal morphology and development, and the evolution of mitochondrial genetic codes, gene order, and nucleotide content.Read moreRead less
House hunting honey bees: speed-accuracy trade-offs in collective decision-making. This project will uncover the mechanisms that underlie the trade-off between speed and accuracy in collective decision-making. We will study two species of honey bee that differ in the relative importance of speed and accuracy when deciding on a new home. Natural selection has shaped the decision-making process differently in the two species, one favouring speed, the other accuracy. We will use the natural wisdom ....House hunting honey bees: speed-accuracy trade-offs in collective decision-making. This project will uncover the mechanisms that underlie the trade-off between speed and accuracy in collective decision-making. We will study two species of honey bee that differ in the relative importance of speed and accuracy when deciding on a new home. Natural selection has shaped the decision-making process differently in the two species, one favouring speed, the other accuracy. We will use the natural wisdom evolved by the bees to design new mathematical models of collective decision-making. These can be applied to create efficient decision-making tools that will be useful for any large organization.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE120101954
Funder
Australian Research Council
Funding Amount
$375,000.00
Summary
Discovering Trans-New Guinea: revealing the prehistory of New Guinea. The third largest language family in the world is Trans-New Guinea spoken throughout New Guinea. The origins of this family are unknown. This project will uncover the history of these peoples by applying computational phylogenetic methods to data from these languages, leading to a deeper understanding of human prehistory in the Pacific.
Discovery Early Career Researcher Award - Grant ID: DE190100805
Funder
Australian Research Council
Funding Amount
$382,656.00
Summary
Phylogenetic methods for genome surveillance of microbial pathogens. This project aims to develop phylogenetic approaches to harness the potential evolution of bacterial and virus pathogens data and to improve early detection of infectious outbreaks. Genome surveillance programs consist in routine sequencing of particular organisms to track their evolution over time. Such programs currently exist for important bacterial and virus pathogens. This project expects to develop computational methods t ....Phylogenetic methods for genome surveillance of microbial pathogens. This project aims to develop phylogenetic approaches to harness the potential evolution of bacterial and virus pathogens data and to improve early detection of infectious outbreaks. Genome surveillance programs consist in routine sequencing of particular organisms to track their evolution over time. Such programs currently exist for important bacterial and virus pathogens. This project expects to develop computational methods to improve our understanding of pathogen outbreak emergence and infectious spread using genome data. This project will expand our knowledge base and research capability in the evolution and epidemiology of infectious agents, and aid in the prevention and control strategies of infectious disease benefiting the research priorities of food and health.Read moreRead less
Nowcasting outbreaks leveraging genomic and epidemiological data. This project aims to inform outbreak response planning by developing new models of infectious disease outbreaks. The project expects to generate new knowledge on the processes driving ongoing outbreaks including those of the novel coronavirus (COVID-19) and African swine fever by integrating the latest advances in Bayesian outbreak inference alongside unique simulation approaches. Expected outcomes should include a shift in how mo ....Nowcasting outbreaks leveraging genomic and epidemiological data. This project aims to inform outbreak response planning by developing new models of infectious disease outbreaks. The project expects to generate new knowledge on the processes driving ongoing outbreaks including those of the novel coronavirus (COVID-19) and African swine fever by integrating the latest advances in Bayesian outbreak inference alongside unique simulation approaches. Expected outcomes should include a shift in how models are developed and used to inform the response to outbreaks as they unfold. This should enable more rapid outbreak containment in Australia and overseas, leading to reduced impacts on public and animal health, and associated industries.Read moreRead less
A new universal mechanism controlling body proportions in animals. This project aims to establish that a recently-discovered mechanism, the inhibitory cascade, determines the basic proportions of appendages and body segments in a diverse range of animal groups, particularly vertebrates and arthropods. The goals of the project are to reveal the molecular mechanisms in mice and insects, and build computer simulations to show how to manipulate the control of development by the inhibitory cascade. T ....A new universal mechanism controlling body proportions in animals. This project aims to establish that a recently-discovered mechanism, the inhibitory cascade, determines the basic proportions of appendages and body segments in a diverse range of animal groups, particularly vertebrates and arthropods. The goals of the project are to reveal the molecular mechanisms in mice and insects, and build computer simulations to show how to manipulate the control of development by the inhibitory cascade. The project should benefit bioengineering by establishing control mechanisms for the manipulation and regeneration of teeth and limbs.Read moreRead less
Biodiversity and population genetics of groundwater calcrete ecosystems of central Western Australia. This project will lead to documentation of a unique subterranean ecosystem of world acclaim, representing a significant component of the biodiversity of the Australian arid zone. It will further contribute to sustainable management of groundwater ecosystems and provide information that can be used to predict and monitor how future water use and climate change may impact on these ecosystems. Resu ....Biodiversity and population genetics of groundwater calcrete ecosystems of central Western Australia. This project will lead to documentation of a unique subterranean ecosystem of world acclaim, representing a significant component of the biodiversity of the Australian arid zone. It will further contribute to sustainable management of groundwater ecosystems and provide information that can be used to predict and monitor how future water use and climate change may impact on these ecosystems. Results generated will provide the knowledge base required to improve the efficiency and scientific rigour of the environmental review process for major resource projects, leading to economic benefits to the mining and environmental consultancy industries, and to Australia in general.Read moreRead less
Assessment of the diversity, distribution and uniqueness of subterranean animals from calcrete aquifers in central western Australia. Recently a rich and diverse subterranean invertebrate fauna (stygofauna) was unexpectedly discovered from numerous isolated calcrete aquifers associated with palaeodrainage channels in central Western Australia. Our recent taxonomic and molecular studies have suggested that stygofaunas within each aquifer may be highly endemic. We aim to test this hypothesis by in ....Assessment of the diversity, distribution and uniqueness of subterranean animals from calcrete aquifers in central western Australia. Recently a rich and diverse subterranean invertebrate fauna (stygofauna) was unexpectedly discovered from numerous isolated calcrete aquifers associated with palaeodrainage channels in central Western Australia. Our recent taxonomic and molecular studies have suggested that stygofaunas within each aquifer may be highly endemic. We aim to test this hypothesis by investigating the diversity, distribution and uniqueness of stygofauna from three major calcrete regions. We further aim to document the environmental conditions and variability within the aquifers and to develop rigorous sampling protocols. Such data are essential for the development of appropriate strategies for sustainable management of subterranean water and their ecosystems.Read moreRead less