Understanding an exotic disease: Initiation of sex and infection by the sugarcane smut Ustilago scitaminea. Australian sugar exports generate almost $2 billion in annual sales, making the sugar industry a critical facet of the Australian economy. In 2006, Australia's primary sugar producing region came under threat when an outbreak of sugarcane smut caused by the fungus Ustilago scitaminea first appeared in Queensland. Management of this potentially devastating disease has focused on breeding pr ....Understanding an exotic disease: Initiation of sex and infection by the sugarcane smut Ustilago scitaminea. Australian sugar exports generate almost $2 billion in annual sales, making the sugar industry a critical facet of the Australian economy. In 2006, Australia's primary sugar producing region came under threat when an outbreak of sugarcane smut caused by the fungus Ustilago scitaminea first appeared in Queensland. Management of this potentially devastating disease has focused on breeding programmes aimed at developing resistant sugarcane cultivars, a complex process hampered by a lack of information about the mechanisms of smut resistance. Our research will provide key insight into the mechanisms by which U. scitaminea infects sugarcane, directing future breeding efforts and protecting this valuable industry against further outbreaks.Read moreRead less
Epidemiology and pathogenesis of chytridiomycosis in Australian frogs. Strong evidence exists that chytridiomycosis is an introduced disease of amphibians that has caused mass mortality resulting in amphibian population declines and extinctions. Epidemiologic studies will include i) field and experimental studies to determine mortality rates, transmission rates, differences in species susceptibility, and persistence of the pathogen as a saprobe, and ii) molecular epidemiology of fungal strains t ....Epidemiology and pathogenesis of chytridiomycosis in Australian frogs. Strong evidence exists that chytridiomycosis is an introduced disease of amphibians that has caused mass mortality resulting in amphibian population declines and extinctions. Epidemiologic studies will include i) field and experimental studies to determine mortality rates, transmission rates, differences in species susceptibility, and persistence of the pathogen as a saprobe, and ii) molecular epidemiology of fungal strains to examine spread and origin. Pathogenicity studies will be aimed at how chytridiomycosis causes death in frogs. The results will be significant for the conservation of amphibians worldwide and in improving our understanding of diseases in free-living animals.Read moreRead less
How bacteria cause disease in the urinary tract. This project will investigate the virulence properties of uropathogenic Escherichia coli, the major causative agent of urinary tract infections (UTI) in humans. The results will help to understand how these bacterial pathogens cause disease and will impact strategies aimed at the prevention and treatment of chronic and recurrent UTI.
New models as tools for defining mechanisms of microbe survival in the urogenital tract. Bacteria that infect the human urogenital tract can cause serious disease and these infections represent a large cost to the health-care system world-wide. This study will focus on how bacteria survive in the human urogenital tract and this will impact on strategies aimed at preventing and treating these infections.
Coproantigen detection tests for diagnosis of intestinal parasitic nematode infection. The aim of this project is to develop new tests for detection of hookworm and Strongyloides, two common intestinal worm infections of humans. These tests offer the potential to replace current tests, namely stool microscopy and serodiagnosis, both of whose performance is unsatisfactory due to deficiencies in sensitivity, specificity and operator convenience. The tests will rely on monoclonal antibodies to dete ....Coproantigen detection tests for diagnosis of intestinal parasitic nematode infection. The aim of this project is to develop new tests for detection of hookworm and Strongyloides, two common intestinal worm infections of humans. These tests offer the potential to replace current tests, namely stool microscopy and serodiagnosis, both of whose performance is unsatisfactory due to deficiencies in sensitivity, specificity and operator convenience. The tests will rely on monoclonal antibodies to detect parasite products in stool. Such testing technology is amenable to configuration in a robust format, suitable for large-scale manufacture. Given the worldwide prevalence of these parasites, the tests will have a market potential of international significance.Read moreRead less
DNA end resection: from basic mechanisms to genome editing. The project aims to understand processes underlying genome editing, a bioengineering process that introduces specific mutations into genomic DNA. Homologous recombination and nonhomologous end-joining pathways play a crucial role in repairing broken DNA strands, which are a toxic form of DNA damage. The proteins that function in the repair process have been recently identified, but it remains unclear how they function on a mechanistic l ....DNA end resection: from basic mechanisms to genome editing. The project aims to understand processes underlying genome editing, a bioengineering process that introduces specific mutations into genomic DNA. Homologous recombination and nonhomologous end-joining pathways play a crucial role in repairing broken DNA strands, which are a toxic form of DNA damage. The proteins that function in the repair process have been recently identified, but it remains unclear how they function on a mechanistic level and how either of the two main pathways is selected. The project aims to define how the activity of a key control protein, Sae2 (Sporulation in the Absence of Spo Eleven), is regulated by posttranslational modifications, and how this activates homologous recombination. The project plans to first use Saccharomyces cerevisiae yeast as a model and then to extend research into the human system in an attempt to improve the efficiency of genome editing. Read moreRead less
Development and commercialization of novel diagnostic assays for the early detection of acute dengue virus infection. Dengue is an emerging disease of the tropics and is endemic in more than 100 countries with up to 100 million cases annually. Of these, 500,000 result in dengue haemorrhagic fever (DHF), a serious life-threatening complication of dengue virus infection. Dengue activity in northern Australia has increased in recent years with suggestions that it may be coming endemic in this count ....Development and commercialization of novel diagnostic assays for the early detection of acute dengue virus infection. Dengue is an emerging disease of the tropics and is endemic in more than 100 countries with up to 100 million cases annually. Of these, 500,000 result in dengue haemorrhagic fever (DHF), a serious life-threatening complication of dengue virus infection. Dengue activity in northern Australia has increased in recent years with suggestions that it may be coming endemic in this country. Early diagnosis, using NS1 based assays should facilitate containment of such outbreaks through earlier identification, treatment, isolation and strategic mosquito control.Read moreRead less
Magnetic Resonance Imaging in Inhomogeneous Magnetic Fields-Part A: The Development of Imaging Methods Using Even Order Zonal Fields. Part B: Slice Correction Due to Non-linear Gradient Fields. The primary aims of this project are to contribute to the new generation of MRI methodologies through technical innovation, with particular emphasis on NMR imaging under inhomogeneous magnetic fields. The new techniques will be of enormous benefit for superconducting magnet design, reducing material usage ....Magnetic Resonance Imaging in Inhomogeneous Magnetic Fields-Part A: The Development of Imaging Methods Using Even Order Zonal Fields. Part B: Slice Correction Due to Non-linear Gradient Fields. The primary aims of this project are to contribute to the new generation of MRI methodologies through technical innovation, with particular emphasis on NMR imaging under inhomogeneous magnetic fields. The new techniques will be of enormous benefit for superconducting magnet design, reducing material usage, and eliminating the need for the expensive post-production shimming process. The entailed project is extremely challenging, while preliminary calculations presented in this application show some progress towards demonstration of feasibility. The program is an ambitious one with a full R&D program over 3 years, which will provide leadership, and to both foster and focus research interest in Australian engineering and scientific endeavors in the field of Magnetic Resonance technology.Read moreRead less
High Field Magnetic Resonance Engineering. The use of high resolution MRI is increasingly important in the quest for molecular imaging and the development of a range of gene therapies, stem cell research and the trialling of new drugs. This research will add momentum to Australia's health technology research community with positive impact on its international research and development profile. Successful outcomes will improve both the applicability and cost-effectiveness of numerous current and ....High Field Magnetic Resonance Engineering. The use of high resolution MRI is increasingly important in the quest for molecular imaging and the development of a range of gene therapies, stem cell research and the trialling of new drugs. This research will add momentum to Australia's health technology research community with positive impact on its international research and development profile. Successful outcomes will improve both the applicability and cost-effectiveness of numerous current and potential medical and non-medical imaging systems with subsequent potential for improved diagnosis in the biotech and health sectors in Australia and overseas. Successful outcomes will provide economic returns through licensing payments from the generated intellectual property.Read moreRead less
Transceive Phased Arrays for Parallel Imaging in High Field Magnetic Resonance Microscopy. This project will contribute to the development of a new generation of Magnetic Resonance Imaging systems that provide new and innovative features capable of significantly increasing the resolution and /or speed of imaging. The economic benefit of being a developer of this technology is clear and significant. These new systems will enhance the efficiency and power of clinical diagnostic testing. Specifica ....Transceive Phased Arrays for Parallel Imaging in High Field Magnetic Resonance Microscopy. This project will contribute to the development of a new generation of Magnetic Resonance Imaging systems that provide new and innovative features capable of significantly increasing the resolution and /or speed of imaging. The economic benefit of being a developer of this technology is clear and significant. These new systems will enhance the efficiency and power of clinical diagnostic testing. Specifically, the enabling of molecular imaging will enhance the study of many more disease states and rapid assessment of new in vivo therapeutic agents. The side-stream benefit to biomedical research and development in Australia is therefore substantial. Read moreRead less