Discovery Early Career Researcher Award - Grant ID: DE150100652
Funder
Australian Research Council
Funding Amount
$345,000.00
Summary
Regulation of organ size and stem cell hierarchy in the developing kidney. Transient stem/progenitor cell populations play essential roles in establishing organ systems. The balance between self-renewal and differentiation in the nephron progenitor population plays a major, but poorly understood, role in regulating kidney development. Factors produced by undifferentiated progenitors promote organ expansion, whereas differentiation of these cells builds functional capacity. What is not clear is h ....Regulation of organ size and stem cell hierarchy in the developing kidney. Transient stem/progenitor cell populations play essential roles in establishing organ systems. The balance between self-renewal and differentiation in the nephron progenitor population plays a major, but poorly understood, role in regulating kidney development. Factors produced by undifferentiated progenitors promote organ expansion, whereas differentiation of these cells builds functional capacity. What is not clear is how the balance between self-renewal and differentiation is regulated in these cells, nor how the control of this fate decision impacts on optimal organ development. This project aims to dissect the molecular identity, regulation, and influence of this stem cell population on kidney development.Read moreRead less
How to build the head: A molecular mechanistic insight. This project aims to gain an insight into the functional output of the gene regulatory network and the molecular determinants that are critical for the formation of the head. Genome-wide sequencing technologies are employed to identify the ensemble of genes that are regulated by Lhx1. By a combination of bioinformatics analysis and a system biology approach, the project aims to build a model of the network of the interacting genes for head ....How to build the head: A molecular mechanistic insight. This project aims to gain an insight into the functional output of the gene regulatory network and the molecular determinants that are critical for the formation of the head. Genome-wide sequencing technologies are employed to identify the ensemble of genes that are regulated by Lhx1. By a combination of bioinformatics analysis and a system biology approach, the project aims to build a model of the network of the interacting genes for head development, and to characterise the function of selected components of this network to refine its architecture and define the dynamics of the network. The knowledge may improve our understanding of the molecular mechanism underpinning the naturally-occurring variation in the forms of major body parts, and of how genes and signals work cooperatively to build an embryo.Read moreRead less
Molecular and cellular regulation of ovarian development. This project aims to understand cell fate decisions during ovarian development. While scientists understand the decision to differentiate into a male-specific cell type, they do not understand differentiation into female-specific cell types. This team has identified marker genes that distinguish between different female cell types in the developing ovary, and will analyse the molecular and cellular mechanisms that drive the development of ....Molecular and cellular regulation of ovarian development. This project aims to understand cell fate decisions during ovarian development. While scientists understand the decision to differentiate into a male-specific cell type, they do not understand differentiation into female-specific cell types. This team has identified marker genes that distinguish between different female cell types in the developing ovary, and will analyse the molecular and cellular mechanisms that drive the development of the ovary. This could provide a deeper understanding of how genes influence cell fate decisions during embryogenesis, and the technologies developed here will be widely applicable in biotechnological research.Read moreRead less
Systems analysis of a critical regulatory hub in sex determination. This project seeks to better understand regulatory mechanisms of embryonic development. A key challenge in biology is to understand how genes act in regulatory networks to coordinate the formation of complex organs during embryo development. Although several genes influence embryo sex determination and gonad development, Sox9 has emerged as a master regulator in this system. This project plans to use new systems biology technolo ....Systems analysis of a critical regulatory hub in sex determination. This project seeks to better understand regulatory mechanisms of embryonic development. A key challenge in biology is to understand how genes act in regulatory networks to coordinate the formation of complex organs during embryo development. Although several genes influence embryo sex determination and gonad development, Sox9 has emerged as a master regulator in this system. This project plans to use new systems biology technologies and transgenic mice to identify the suite of Sox9 target genes and partner proteins. Anticipated outcomes include insights into sex determination, stem cell differentiation, and development of many other organ systems that depend on Sox9 function, providing proof-of-concept for high-throughput analysis of molecular control networks in the embryo.Read moreRead less
Modelling stem cell decisions in mouse germ cells. A fundamental problem in biology is how cells transition from pluripotency to lineage commitment. The aim of this project is to study this problem, in vivo, by dissecting the mechanisms active during normal development of primordial germ cells (PGCs, gamete stem cells) in the mouse fetal testis. Using molecular, cellular and whole animal assays three central hypotheses will be addressed regarding genes likely to be important in the process. This ....Modelling stem cell decisions in mouse germ cells. A fundamental problem in biology is how cells transition from pluripotency to lineage commitment. The aim of this project is to study this problem, in vivo, by dissecting the mechanisms active during normal development of primordial germ cells (PGCs, gamete stem cells) in the mouse fetal testis. Using molecular, cellular and whole animal assays three central hypotheses will be addressed regarding genes likely to be important in the process. This research will reveal the molecular nature of bipotential switches in cell identity and will inform some of the most important biological issues of our time, including tissue regeneration, aging and cancer biology.Read moreRead less
Molecular regulation of the mitosis-to-meiosis switch in germ cells. This project will build on our recent major discoveries to study how sperm and oocyte production begins during fetal life. This issue is critical for understanding fertility and infertility in animal species and humans. The answers generated will lay the groundwork for fertility control in humans, pets, pests and endangered animals.
Dissecting endocardial signals required for cardiac muscle regeneration in zebrafish. Unlike humans, zebrafish have an extraordinary ability to regenerate their damaged hearts. This project will study the endocardium, a thin layer of cells lining the inner heart, to find important genes for regeneration. Results from this study may provide insights into proper repair of human hearts after injury.
Genetic regulation of avian sex determination. This project aims to enhance our understanding of gonadal sex determination (testis versus ovary development), using innovative genetic approaches that exploit the avian embryo as a model system. The project aims to define the key molecular events regulating gonadal sex determination in birds. It intends to enhance knowledge in the area of cell biology, embryology, and sex determination specifically. Importantly, it will have application to the poul ....Genetic regulation of avian sex determination. This project aims to enhance our understanding of gonadal sex determination (testis versus ovary development), using innovative genetic approaches that exploit the avian embryo as a model system. The project aims to define the key molecular events regulating gonadal sex determination in birds. It intends to enhance knowledge in the area of cell biology, embryology, and sex determination specifically. Importantly, it will have application to the poultry industry. Currently, half of all hatchlings (the undesired sex) are culled. The proposed project intends to illuminate those genetic pathways that can be targeted to produce single-sex lines of birds, a major goal of the multi-billion dollar Australian and global poultry industries.Read moreRead less
Regulatory roles of the RNA helicase DDX5 in male germline stem cells. This project aims to investigate the role of the RNA helicase DDX5 in regulating gene expression programs of male germline stem cells by utilising novel mouse models, stem cell culture and genome-wide analysis approaches. This project expects to generate new knowledge in the area of germline maintenance and adult stem cells using innovative in vivo and in vitro experimental systems. Expected outcomes of this project will incl ....Regulatory roles of the RNA helicase DDX5 in male germline stem cells. This project aims to investigate the role of the RNA helicase DDX5 in regulating gene expression programs of male germline stem cells by utilising novel mouse models, stem cell culture and genome-wide analysis approaches. This project expects to generate new knowledge in the area of germline maintenance and adult stem cells using innovative in vivo and in vitro experimental systems. Expected outcomes of this project will include gain of substantial insight into molecular mechanisms underlying germline stem cell function and gene regulation within the male germline. This should provide significant benefits, including advancement of reproductive science and development of systems applicable for animal germline preservation and manipulation.Read moreRead less
Chicken and ChIPs; genetic control of avian gonadal development. This project aims to improve our understanding of gonad formation at the genetic level, using unique approaches that exploit the chicken embryo as a model system. Gonad formation during embryonic life provides an excellent model for studying the genetic control of development. The project plans to use innovative methods to study novel and known gonad-determining genes. The project seeks to make a substantial contribution to our und ....Chicken and ChIPs; genetic control of avian gonadal development. This project aims to improve our understanding of gonad formation at the genetic level, using unique approaches that exploit the chicken embryo as a model system. Gonad formation during embryonic life provides an excellent model for studying the genetic control of development. The project plans to use innovative methods to study novel and known gonad-determining genes. The project seeks to make a substantial contribution to our understanding of cell fate decisions, sex determination and gonad development. It also potentially has application to the poultry industry by illuminating those genes and pathways that can be targeted to modulate sex determination in chickens, which is a goal of the industry.Read moreRead less