Special Research Initiatives - Grant ID: SR0354745
Funder
Australian Research Council
Funding Amount
$20,000.00
Summary
International Network for Genomics of the Root-Soil Interface (INGORSI). INGORSI brings together a new group of leading Australian and International researchers with common interests in the application of bioinformatics and genomics to understanding the root-soil interface, particularly the microbiology of this interface. The Network will communicate via a novel ?virtual? seminar room, with a research focus on molecular signals between organisms and plants of the rhizosphere that promote or pre ....International Network for Genomics of the Root-Soil Interface (INGORSI). INGORSI brings together a new group of leading Australian and International researchers with common interests in the application of bioinformatics and genomics to understanding the root-soil interface, particularly the microbiology of this interface. The Network will communicate via a novel ?virtual? seminar room, with a research focus on molecular signals between organisms and plants of the rhizosphere that promote or prevent plant growth, and also potentially impact human health. The network will facilitate high quality basic science, with linked programs that promote its application, to produce outcomes of benefit to plant crops, human health and sustainable agriculture.Read moreRead less
Evolution of diverse symbiotic phenotypes among native soil bacteria following spread of a genomic island from a rhizobial inoculant. The quality of legume protein depends on symbiotic nitrogen fixation by root nodule bacteria (RNB). Sustainable legume production in Australian agriculture depends on legume inoculation with effective strains of these bacteria. Unfortunately inoculant strains transfer DNA to other soil bacteria resulting in soil populations of RNB that compete for nodulation but a ....Evolution of diverse symbiotic phenotypes among native soil bacteria following spread of a genomic island from a rhizobial inoculant. The quality of legume protein depends on symbiotic nitrogen fixation by root nodule bacteria (RNB). Sustainable legume production in Australian agriculture depends on legume inoculation with effective strains of these bacteria. Unfortunately inoculant strains transfer DNA to other soil bacteria resulting in soil populations of RNB that compete for nodulation but are less effective in nitrogen fixation. This transfer of DNA threatens a $2 billion asset in Australian agriculture. We will use molecular microbial ecology to investigate the mechanisms of genetic transfer of symbiotic DNA in RNB, and use this knowledge to prevent it.Read moreRead less
Genomic and molecular characterisation of a novel Australian leishmania pathogen. Leishmaniasis is the second most serious protozoal disease after malaria. This project will help characterise the first Leishmania species identified in Australia providing molecular tools to monitor the pathogen and a detailed assessment of any potential risk to human health. Comparative analysis with more pathogenic species will help identify genes and mechanisms that determine the progression of human disease le ....Genomic and molecular characterisation of a novel Australian leishmania pathogen. Leishmaniasis is the second most serious protozoal disease after malaria. This project will help characterise the first Leishmania species identified in Australia providing molecular tools to monitor the pathogen and a detailed assessment of any potential risk to human health. Comparative analysis with more pathogenic species will help identify genes and mechanisms that determine the progression of human disease leading to the potential identification of new drug and vaccine targets. The methodologies and expertise developed will be used will be available to other research groups working on infectious diseases.Read moreRead less
Interaction of Cryptosporidium lifecycle stages with aquatic biofilm communities. Cryptosporidium is the most common non-viral cause of diarrhoeal disease in humans worldwide, and of increasing significance as a cause of disease in livestock and wildlife. It is one of the most significant waterborne pathogens and a major challenge to the provision of safe drinking water by water utilities. Biofilms are a poorly studied component of Cryptosporidium's ecosystem, and can act as an environmental res ....Interaction of Cryptosporidium lifecycle stages with aquatic biofilm communities. Cryptosporidium is the most common non-viral cause of diarrhoeal disease in humans worldwide, and of increasing significance as a cause of disease in livestock and wildlife. It is one of the most significant waterborne pathogens and a major challenge to the provision of safe drinking water by water utilities. Biofilms are a poorly studied component of Cryptosporidium's ecosystem, and can act as an environmental reservoir of the parasite in water storages and pipes and an unpredictable source of water contamination. This project will investigate the nature of this reservoir and factors that support the parasite's survival with a view to providing information of value in limiting the public health significance of the biofilm reservoir.Read moreRead less
Rapid mapping of genes for complex traits. This project will develop a new resource that will allow rapid identification of genes controlling complex traits. This world-leading resource will improve knowledge of diseases like diabetes and neurological diseases.
Transition from phosphate mining to an economically, environmentally and socially viable agricultural industry on Christmas Island. The main industry on Christmas Island is mining of rock phosphate, but supplies will run out between 2025 and 2030. Consequently, there is an urgent and compelling need to develop other economic industries to support the resident island population by the time mining ceases. This project aims to utilise the project team’s extensive knowledge on legumes, nitrogen fixi ....Transition from phosphate mining to an economically, environmentally and socially viable agricultural industry on Christmas Island. The main industry on Christmas Island is mining of rock phosphate, but supplies will run out between 2025 and 2030. Consequently, there is an urgent and compelling need to develop other economic industries to support the resident island population by the time mining ceases. This project aims to utilise the project team’s extensive knowledge on legumes, nitrogen fixing bacteria and plant growth promoting bacteria to establish the basis for a viable agricultural industry on the Island. The project aims to provide: reliable and sustainable food sources for the local population; potential food export opportunities to southeast Asia; environmental benefits from the improvement of soils; and economic development of allied agricultural industries.Read moreRead less
Evolution and the immune system: genetic differences in immune response between human populations due to adaptation to living in different geo-climatic locations. The project, which investigates the genetics of inter-population differences in immune response, will lead to advances in immunology and population genetics research, explain present population specific differences in disease incidence and possibly forecast future population trends of diseases such as asthma and allergy. The study will ....Evolution and the immune system: genetic differences in immune response between human populations due to adaptation to living in different geo-climatic locations. The project, which investigates the genetics of inter-population differences in immune response, will lead to advances in immunology and population genetics research, explain present population specific differences in disease incidence and possibly forecast future population trends of diseases such as asthma and allergy. The study will strengthen ties with collaborators around the world, thus promoting excellence in Australian research and gain Australia prestige in the international community as a country that produces research of global significance. Understanding the immune system's 'recent evolutionary roots' has implications for the health of Australians, especially in light of Australia's increasingly multi-ethnic background.Read moreRead less
Testing the costs and benefits of gene flow. The mixing of individuals from different populations has traditionally been viewed as beneficial because it maintains genetic variation and offsets the deleterious effects of inbreeding. However, this practice can also have detrimental effects on the fitness of populations. In this project field and laboratory experiments will test whether the benefits gained by mixing of individuals from different populations outweigh the costs or vice versa. In add ....Testing the costs and benefits of gene flow. The mixing of individuals from different populations has traditionally been viewed as beneficial because it maintains genetic variation and offsets the deleterious effects of inbreeding. However, this practice can also have detrimental effects on the fitness of populations. In this project field and laboratory experiments will test whether the benefits gained by mixing of individuals from different populations outweigh the costs or vice versa. In addition to providing information essential for the management of endangered species, the results will provide valuable insights on the processes that determine species' ranges and how new species evolve.Read moreRead less
Identifying the diversity and evolution of loci associated with adaptation to aridity/heat and salinity in ancient cereal crops. This project will use ancient grains of wheat, barley and rye to find 'lost' genetic diversity at key genes associated with resistance to aridity, salt and disease. This project will make the proteins of key genes, and study their interaction with the environment over time by measuring ions in the grains to reveal the ancient environmental conditions.
Population dynamics and genetic variation of plants with contrasting fire responses. We combine the traditional concerns of population viability analyses with the modern techniques of DNA fingerprinting for precise genotyping of individual plants and their seeds. We expect major breakthroughs in our understanding of how fire-killed species have survived thousands of years of frequent burning by Aborigines (by identifying seeds dispersed long distances from burnt parents); how paternity of offspr ....Population dynamics and genetic variation of plants with contrasting fire responses. We combine the traditional concerns of population viability analyses with the modern techniques of DNA fingerprinting for precise genotyping of individual plants and their seeds. We expect major breakthroughs in our understanding of how fire-killed species have survived thousands of years of frequent burning by Aborigines (by identifying seeds dispersed long distances from burnt parents); how paternity of offspring changes over the lifespan of plants which retain their seeds for many years; at what age within-plant genetic variation is at a maximum as a guide to optimal fire management; and the extent that deleterious somatic mutations explain low seed set among long-lived species.Read moreRead less