Evolutionary history and impact of adeno-associated viruses in Australia. Recently accrued evidence identifies Australia as an ideal closed-model system in which to elucidate the evolutionary history of a group of non-pathogenic viruses, known as adeno-associated viruses (AAVs). This project aims to trace back the evolutionary history of AAVs for tens of millions of years via molecular fossil imprints left behind by ancient viral invasions of Australian marsupial genomes. Concurrently, the poten ....Evolutionary history and impact of adeno-associated viruses in Australia. Recently accrued evidence identifies Australia as an ideal closed-model system in which to elucidate the evolutionary history of a group of non-pathogenic viruses, known as adeno-associated viruses (AAVs). This project aims to trace back the evolutionary history of AAVs for tens of millions of years via molecular fossil imprints left behind by ancient viral invasions of Australian marsupial genomes. Concurrently, the potential impact that these viral invasions had on the evolutionary development of their ancestral hosts will be investigated. This could facilitate previously unattainable insights into both AAV and marsupial evolution, with broader implications relevant to the advancement of the fields of virology and mammalian evolution.Read moreRead less
Lost at sea? Understanding adaptation and dispersal in spiny lobsters. Continual recruitment of young is fundamental to the replenishment of populations, especially when a stock is fished. Existing theory suggests that species with very long planktonic larval stages disperse widely, ensuring their genes are well mixed. However, recently identified genetic differences between populations of rock lobster challenge this paradigm and demonstrate that despite larvae mixing in the ocean for years, loc ....Lost at sea? Understanding adaptation and dispersal in spiny lobsters. Continual recruitment of young is fundamental to the replenishment of populations, especially when a stock is fished. Existing theory suggests that species with very long planktonic larval stages disperse widely, ensuring their genes are well mixed. However, recently identified genetic differences between populations of rock lobster challenge this paradigm and demonstrate that despite larvae mixing in the ocean for years, local recruitment and/or adaptation are at play. Recent developments in genomics and bioinformatics should allow this project to understand the ecological processes underpinning these genetic signatures and determine their evolutionary implications. Such findings could direct targeted rebuilding of depleted fisheries stocks.Read moreRead less
Maternal effects and sex allocation: an integrated approach. This project will produce research of a high international standard combining a number of key fields in evolution and ecology. The team we have assembled provides a link between Australian-based researchers and leading overseas theoreticians facilitating integration between evolutionary theory and empirical research on the unique Australian fauna. Furthermore, while climate change is identified as a priority area for research, Australi ....Maternal effects and sex allocation: an integrated approach. This project will produce research of a high international standard combining a number of key fields in evolution and ecology. The team we have assembled provides a link between Australian-based researchers and leading overseas theoreticians facilitating integration between evolutionary theory and empirical research on the unique Australian fauna. Furthermore, while climate change is identified as a priority area for research, Australia typically lacks the history of long-term phenological monitoring that is required to understand climate change impacts. This project takes an important step towards addressing this shortcoming.Read moreRead less
The role of recombination in eucalypt evolution. Meiotic recombination is a key source of the genetic variation upon which evolution thrives. This project aims to exploit new genomic resources to provide the first detailed study of recombination in Australia’s iconic Eucalypts and clarify its evolutionary role. This project will study: variation in the rate of recombination along the 11 Eucalypt chromosomes, and determine genome features which are associated with ‘hotspots’ and ‘coldspots’ of re ....The role of recombination in eucalypt evolution. Meiotic recombination is a key source of the genetic variation upon which evolution thrives. This project aims to exploit new genomic resources to provide the first detailed study of recombination in Australia’s iconic Eucalypts and clarify its evolutionary role. This project will study: variation in the rate of recombination along the 11 Eucalypt chromosomes, and determine genome features which are associated with ‘hotspots’ and ‘coldspots’ of recombination; the patterns of variation in recombination rate between species, genotypes, sexes and chromosomes; and, whether the environment and population history affect recombination and thus evolvability of natural populations.Read moreRead less
Genetic architecture of species divergence and hybridisation in eucalypts. Eucalypts are an icon of Australia and are of great economic and ecological significance to the nation. They are the most widely planted hardwood trees in the world, but Australia is the centre of origin of most species and the custodian of this important native bioresource. Understanding the evolutionary processes that shape diversity in this internationally significant genus is important for its long-term management a ....Genetic architecture of species divergence and hybridisation in eucalypts. Eucalypts are an icon of Australia and are of great economic and ecological significance to the nation. They are the most widely planted hardwood trees in the world, but Australia is the centre of origin of most species and the custodian of this important native bioresource. Understanding the evolutionary processes that shape diversity in this internationally significant genus is important for its long-term management and conservation. This project links to large international initiatives currently underway for high-density mapping and sequencing of the eucalypt genome, to enhance the flow of information gained back to Australia for scientific, economic and environmental benefit.Read moreRead less
From developmental stability to organismic senility: Hox genes and telomere impact on life history evolution. Australia benefits from training researchers and technicians in new, break-through biotechnology and from applying this knowledge to relevant, cutting-edge questions in highly publicized research fields. This project contains both these ingredients. Our model species (a lizard) has a relatively high level of offspring malformations (ca 15%), which makes it much more likely to detect thei ....From developmental stability to organismic senility: Hox genes and telomere impact on life history evolution. Australia benefits from training researchers and technicians in new, break-through biotechnology and from applying this knowledge to relevant, cutting-edge questions in highly publicized research fields. This project contains both these ingredients. Our model species (a lizard) has a relatively high level of offspring malformations (ca 15%), which makes it much more likely to detect their underlying genetic mechanism. Furthermore, we can also assess how these animals survive and reproduce in relation to how quickly they age, which can be measured by assessing the shortening of telomeres per unit time. Thus, this collaboration provides an opportunity to train Australian researchers and in that process generate very high profile research.Read moreRead less
Genetics of species differentiation and hybridisation in Eucalyptus. Eucalypts are an icon of Australia and of great economic and ecological significance. This project will use genomic technologies to provide novel insights into the evolutionary processes that shape diversity in this genus. This will contribute to the development of better conservation and management practices for this valuable genetic resource.
Genetics of species differentiation and hybridisation in Eucalyptus. This project aims to use state-of-the-art genomic technologies to characterise genes and genomic regions important for speciation and adaptation in Australia’s iconic eucalypts, and study the importance of hybridisation between species, especially during range expansion and contraction. A major international effort has seen a eucalypt become the second forest tree genome sequenced. This project aims to link the expanding intern ....Genetics of species differentiation and hybridisation in Eucalyptus. This project aims to use state-of-the-art genomic technologies to characterise genes and genomic regions important for speciation and adaptation in Australia’s iconic eucalypts, and study the importance of hybridisation between species, especially during range expansion and contraction. A major international effort has seen a eucalypt become the second forest tree genome sequenced. This project aims to link the expanding international knowledge on the eucalypt genome to the evolutionary dynamics of wild populations in Australia to provide unprecedented insights into the nature of species and processes which have shaped their evolution. These insights may inform their breeding as well as their conservation and management in Australia.Read moreRead less
From genes to ecosystems: does genetic divergence in eucalyptus alter biodiversity and ecosystem function? The project will use a dominant tree species of south-eastern Australia to examine how genetic based variation in its traits influences community organisation, biodiversity and ecosystem processes. Outcomes from this research will be important for responding to an uncertain future environment and maintaining the services ecosystems provide.
Developing best-practice approaches for restoring forest ecosystems that are resilient to climate change. Existing restoration practices for forests tend to rely on ad hoc rules of thumb that lack a firm scientific basis and risk failure due to climate change. The project will model biodiversity, genetic and growth performance data to develop best-practice restoration guidelines for forest ecosystems to enable them to become resilient to climate change and maximise biodiversity and carbon captur ....Developing best-practice approaches for restoring forest ecosystems that are resilient to climate change. Existing restoration practices for forests tend to rely on ad hoc rules of thumb that lack a firm scientific basis and risk failure due to climate change. The project will model biodiversity, genetic and growth performance data to develop best-practice restoration guidelines for forest ecosystems to enable them to become resilient to climate change and maximise biodiversity and carbon capture outcomes.Read moreRead less