Regulation of principal components of the antioxidant system in table grapes. An expanded ?health-claims? system will likely be enacted by Food Standards Australia New Zealand within two years. Horticultural industries are attracted to the promotional ?point of difference? this offers. Many health-promoting compounds are antioxidants, including polyphenols that are abundant in fruit such as grape and citrus. Antioxidants are also involved in the plant's defences against abiotic and biotic stres ....Regulation of principal components of the antioxidant system in table grapes. An expanded ?health-claims? system will likely be enacted by Food Standards Australia New Zealand within two years. Horticultural industries are attracted to the promotional ?point of difference? this offers. Many health-promoting compounds are antioxidants, including polyphenols that are abundant in fruit such as grape and citrus. Antioxidants are also involved in the plant's defences against abiotic and biotic stress. Here, the WA Table Grape industry has committed funds for an APAI to study regulation of antioxidants in relation to nutritional and postharvest qualities. Effects of preconditioning with mild oxidative stresses will be assayed, postharvest, using molecular and biochemical techniques.Read moreRead less
New biotech methods for crop quality assurance. Quality assurance of crop products is a key for Australia to be competitive in the world marketplace. The power of molecular diagnostics has not been applied to this important but neglected part of the produce handling chain. In this project research will be undertaken that will lead to low cost on site assays to test for variety preservation, contamination, and presence of pests and diseases. It employs the tools of genomics and proteomics to p ....New biotech methods for crop quality assurance. Quality assurance of crop products is a key for Australia to be competitive in the world marketplace. The power of molecular diagnostics has not been applied to this important but neglected part of the produce handling chain. In this project research will be undertaken that will lead to low cost on site assays to test for variety preservation, contamination, and presence of pests and diseases. It employs the tools of genomics and proteomics to provide basic understanding of processes which can be developed into cost effective analyses for practical use by industry to ensure quality assurance.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE150100031
Funder
Australian Research Council
Funding Amount
$630,000.00
Summary
PacBio long read sequencer for the Ramaciotti Genomics Consortium of NSW. PacBio long read sequencer for the Ramaciotti Genomics Consortium of New South Wales: This will be one of the first PacBio sequencers for a service facility in Australia. Unlike other next-generation sequencers that have read lengths of 100 to 700 bases, the PacBio long read sequencer generates an average read length of 8,000 bases and a maximum of 20,000 bases. It will be used for research in genomics, metagenomics and tr ....PacBio long read sequencer for the Ramaciotti Genomics Consortium of NSW. PacBio long read sequencer for the Ramaciotti Genomics Consortium of New South Wales: This will be one of the first PacBio sequencers for a service facility in Australia. Unlike other next-generation sequencers that have read lengths of 100 to 700 bases, the PacBio long read sequencer generates an average read length of 8,000 bases and a maximum of 20,000 bases. It will be used for research in genomics, metagenomics and transcriptomics.Read moreRead less
Understanding how cells compact and segregate DNA in vertebrates. How a cell compacts and divides its DNA is still a major unanswered question in biology. This project will determine the way in which a cell compacts its DNA nearly ten thousand fold to allow the faithful and accurate segregation to daughter nuclei.
The future of fruit fly control: making the Sterile Insect Technique work for Queensland fruit fly. The future of fruit fly control in Australia lies in the Sterile Insect Technique (SIT): it is the only non-pesticide option that can totally eliminate pest populations. Millions of dollars have already been invested to establish an SIT program against Queensland fruit fly (Q-fly) in southern and eastern Australia, but this program is currently largely ineffective due to the poor performance of t ....The future of fruit fly control: making the Sterile Insect Technique work for Queensland fruit fly. The future of fruit fly control in Australia lies in the Sterile Insect Technique (SIT): it is the only non-pesticide option that can totally eliminate pest populations. Millions of dollars have already been invested to establish an SIT program against Queensland fruit fly (Q-fly) in southern and eastern Australia, but this program is currently largely ineffective due to the poor performance of the mass-reared sterile flies. This project will apply genetic, ecological and technical solutions to the problems facing the current Q-fly control program. Effective control of Q-fly will enhance the international competitiveness of Australia's horticultural industries.Read moreRead less
Cellular determinants of retrotransposition. This project aims to understand the processes that control retrotransposition in a genome. Transposable elements make up more than 50% of human genomes. The accumulation of retrotransposons through millions of years of evolution has shaped the genomes of all eukaryotic organisms, including humans. Researchers have elucidated mechanisms the host uses to defend the genome against insertional mutagenesis by retrotransposons, but the cellular machinery an ....Cellular determinants of retrotransposition. This project aims to understand the processes that control retrotransposition in a genome. Transposable elements make up more than 50% of human genomes. The accumulation of retrotransposons through millions of years of evolution has shaped the genomes of all eukaryotic organisms, including humans. Researchers have elucidated mechanisms the host uses to defend the genome against insertional mutagenesis by retrotransposons, but the cellular machinery and genomic environments needed for retrotransposition are undefined. This project aims to use models to uncover the mechanisms that control retrotransposition. This is expected to reveal more about human origins.Read moreRead less
Regulation And Role Of Transcription At The Centromere.
Funder
National Health and Medical Research Council
Funding Amount
$737,801.00
Summary
Every human cell has 46 chromosomes. Chromosomes are structures that carry genes in all our cells. The centromere is an essential component of a chromosome. It controls the process of cell division, and it ensures the equal division of the duplicated chromosomes. Defects in centromere function can result in various genetic diseases and development of cancers. The structure of the centromere is unique and its properties are determined by an array of proteins and other as yet unknown factors that ....Every human cell has 46 chromosomes. Chromosomes are structures that carry genes in all our cells. The centromere is an essential component of a chromosome. It controls the process of cell division, and it ensures the equal division of the duplicated chromosomes. Defects in centromere function can result in various genetic diseases and development of cancers. The structure of the centromere is unique and its properties are determined by an array of proteins and other as yet unknown factors that bind to it. In our preliminary work, we have demonstrated that a novel non-protein component in the form of RNA (which are expressed products of genes) is essential for the binding of key proteins to the centromere. The presence and importance of such an RNA component has not been previously suspected and represents an exciting new mechanism that help to determine the functional and structural integrity of the centromere. In this project, we propose to study the details of this RNA and to define how this RNA-related mechanism operates to ensure the proper assembly and function of the centromere during cell division.Read moreRead less
How does an essential histone variant effect changes in gene expression? The mechanisms that determine how genes are switched on and off in different tissues and at different times are not clearly known. It is well established that gene expression patterns are determined in part by the molecular signals transmitted by variation in the proteins that package eukaryotic DNA. Our aim is to understand new aspects of these mechanisms that revolve around how our DNA is packaged. This foundational knowl ....How does an essential histone variant effect changes in gene expression? The mechanisms that determine how genes are switched on and off in different tissues and at different times are not clearly known. It is well established that gene expression patterns are determined in part by the molecular signals transmitted by variation in the proteins that package eukaryotic DNA. Our aim is to understand new aspects of these mechanisms that revolve around how our DNA is packaged. This foundational knowledge will deepen our understanding of gene regulation in all complex organisms and will inform future efforts to rationally modulate gene expression patterns in agriculture, research and other important areas.Read moreRead less
Regulatory architecture of the trunk-to-tail transition. This project aims to elucidate gene regulatory mechanisms that control how the head-to-tail axis is laid down during embryonic development. The project capitalises on unique pluripotent stem cell resources and cutting-edge genomic technology developed by the team. This project expects to generate new knowledge in the area of developmental biology and gene regulation that is anticipated to have wider application to the understanding of evol ....Regulatory architecture of the trunk-to-tail transition. This project aims to elucidate gene regulatory mechanisms that control how the head-to-tail axis is laid down during embryonic development. The project capitalises on unique pluripotent stem cell resources and cutting-edge genomic technology developed by the team. This project expects to generate new knowledge in the area of developmental biology and gene regulation that is anticipated to have wider application to the understanding of evolutionary mechanisms and ultimately regenerative medicine.Read moreRead less
Deciphering the regulatory principles of metazoan development. This proposal aims to elucidate how regulatory elements in the genome, known as enhancers, determine the identity and function of animal tissues. Currently, it is believed that enhancers cannot be traced across evolutionarily distant animals. The project uses novel concepts, computational and molecular approaches to identify deeply conserved enhancers. It further dissects the mechanism of function by proteomics and high-throughput ge ....Deciphering the regulatory principles of metazoan development. This proposal aims to elucidate how regulatory elements in the genome, known as enhancers, determine the identity and function of animal tissues. Currently, it is believed that enhancers cannot be traced across evolutionarily distant animals. The project uses novel concepts, computational and molecular approaches to identify deeply conserved enhancers. It further dissects the mechanism of function by proteomics and high-throughput genomics. The expected outcomes will overturn our current view on enhancer evolution and reposition our understanding of how enhancers are functionally encoded in the genome. The work is an important contribution to understanding cellular complexity and species evolution with wide-ranging impact in genetics.Read moreRead less