Special Research Initiatives - Grant ID: SR0354908
Funder
Australian Research Council
Funding Amount
$10,000.00
Summary
The Insect-Plant Chemical Ecology Network (IPCEN). We bring together plant molecular biology, entomology and analytical chemistry to transform three leading fields of Australian research into an advanced science with far reaching capabilities in innovative research and applied outcomes. Expertise studying the biochemical pathways that produce specific plant compounds and expertise in insect recognition and response to these chemicals will be brought together. This will lead to new research outco ....The Insect-Plant Chemical Ecology Network (IPCEN). We bring together plant molecular biology, entomology and analytical chemistry to transform three leading fields of Australian research into an advanced science with far reaching capabilities in innovative research and applied outcomes. Expertise studying the biochemical pathways that produce specific plant compounds and expertise in insect recognition and response to these chemicals will be brought together. This will lead to new research outcomes and solutions to problems in agriculture, horticulture, forestry and protection of Australia's native flora. Researchers are struggling to create these links, constrained by disciplinary boundaries and geographical isolation. Key industries and researchers already support this proposal.Read moreRead less
The co-expression of visual pigments in a single photoreceptor: environmental regulation and spectral tuning. The light sensitive cells (photoreceptors) in the vertebrate retina contain filters (oil droplets) and visual pigments (opsins). These structures tune the incoming light and initiate the visual process, respectively. Exciting new research reveals that some vertebrates express more than one opsin within a single photoreceptor. We plan to examine the regulation of single and two co-express ....The co-expression of visual pigments in a single photoreceptor: environmental regulation and spectral tuning. The light sensitive cells (photoreceptors) in the vertebrate retina contain filters (oil droplets) and visual pigments (opsins). These structures tune the incoming light and initiate the visual process, respectively. Exciting new research reveals that some vertebrates express more than one opsin within a single photoreceptor. We plan to examine the regulation of single and two co-expressed opsin genes by manipulating the light environment. We expect to determine the environmental triggers for visual pigment tuning and the effects of co-expression on colour vision.Read moreRead less
Environmental regulation of opsin expression and spectral tuning in the vertebrate retina. Exciting new evidence shows that the vertebrate visual system is extraordinarily plastic and that the colour and brightness of the ambient light regulates both the spatial and temporal expression of visual pigments (opsin) genes and the degree of spectral filtering in the retina. Based on findings that more than one visual pigment can be co-expressed in a single photoreceptor type, we plan to manipulate th ....Environmental regulation of opsin expression and spectral tuning in the vertebrate retina. Exciting new evidence shows that the vertebrate visual system is extraordinarily plastic and that the colour and brightness of the ambient light regulates both the spatial and temporal expression of visual pigments (opsin) genes and the degree of spectral filtering in the retina. Based on findings that more than one visual pigment can be co-expressed in a single photoreceptor type, we plan to manipulate the light environment in order to identify and quantify the effect of different lighting regimes by morphological, spectral and molecular techniques in a concerted effort to understand the regulation of opsin expression.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE0775763
Funder
Australian Research Council
Funding Amount
$189,000.00
Summary
High throughput orthogonal mass spectrometer for biotechnology research in WA. The new 'orthogonal' mass spectrometer will be housed at the WA State Agricultural Biotechnology Centre at Murdoch University (SABC). The SABC is a multi-user university centre that provides equal access for researchers from all universities, state government and industry to major facilities. The equipment will provide a competitive advantage to researchers undertaking fundamental and applied projects that underpin ....High throughput orthogonal mass spectrometer for biotechnology research in WA. The new 'orthogonal' mass spectrometer will be housed at the WA State Agricultural Biotechnology Centre at Murdoch University (SABC). The SABC is a multi-user university centre that provides equal access for researchers from all universities, state government and industry to major facilities. The equipment will provide a competitive advantage to researchers undertaking fundamental and applied projects that underpin new developments in plant and animal agriculture. Outcomes include: development of new molecular markers to speed crop improvement and quality, animal genetic improvement and health, and support for new biotechnology companies. This will benefit the community through more productive, competitive and sustainable agriculture.Read moreRead less
Systemic control of nodule proliferation. We aim to clone and characterize the functions of the supernodulation (NTS-1) locus of soybean using positional cloning and functional genomics approaches. Supernodulation fascinatingly results from a mutant Nts-1 gene functioning in the shoot, although the phenotype is expressed as excessive nodule proliferation in the root. The cloned gene will be used to monitor expression changes after inoculation with Bradyrhizobium, treatment with nitrate, nod-fac ....Systemic control of nodule proliferation. We aim to clone and characterize the functions of the supernodulation (NTS-1) locus of soybean using positional cloning and functional genomics approaches. Supernodulation fascinatingly results from a mutant Nts-1 gene functioning in the shoot, although the phenotype is expressed as excessive nodule proliferation in the root. The cloned gene will be used to monitor expression changes after inoculation with Bradyrhizobium, treatment with nitrate, nod-factor, xylem exudates and phytohormones. We will use RT-PCR, in situ hybridisation and reporter gene expression in transgenic plants. Microarray analysis of soybean ESTs (4200 arrayed) will analyse concurrent gene expression changes in both root and shoot.Read moreRead less
A novel link between plant pathogen defence and DNA repair capability. Plants and plant-based industries are essential for the provision of food, clothing and building materials and underpin the economies of rural communities. Plant yield and quality and the biodiversity of natural systems are dramatically reduced by disease. The fundamental knowledge gained from our research will enable manipulation of the factors that enhance disease resistance resulting in a significant benefit to Australian ....A novel link between plant pathogen defence and DNA repair capability. Plants and plant-based industries are essential for the provision of food, clothing and building materials and underpin the economies of rural communities. Plant yield and quality and the biodiversity of natural systems are dramatically reduced by disease. The fundamental knowledge gained from our research will enable manipulation of the factors that enhance disease resistance resulting in a significant benefit to Australian agriculture and protection of our natural resources. The current reliance for disease control on chemicals that damage the environment will be reduced and our research will contribute directly to the provision of cheaper, simpler and more effective methods of control.
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A New Window into Transgene Silencing in Plants: mechanisms of copy-number independent, 5' sequence dependent, post-transcriptional silencing in a complex polyploid. Silencing of introduced genes is a major problem limiting plant molecular improvement. Sugarcane, a complex polyploid, shows the most efficient transgene silencing ever observed in plants. Silencing operates on the RNA, depends on the upstream sequence of the gene, and is independent of copy number. Other plant species develop endop ....A New Window into Transgene Silencing in Plants: mechanisms of copy-number independent, 5' sequence dependent, post-transcriptional silencing in a complex polyploid. Silencing of introduced genes is a major problem limiting plant molecular improvement. Sugarcane, a complex polyploid, shows the most efficient transgene silencing ever observed in plants. Silencing operates on the RNA, depends on the upstream sequence of the gene, and is independent of copy number. Other plant species develop endopolyploidy with age, and show unpredictable or patchy silencing. We speculate that differential silencing is a natural control mechanism in the exploitation of polyploidy in plants. The sugarcane system provides an exceptional opportunity to identify the sequences that trigger and protect from silencing, and to develop approaches to avoid the problem.Read moreRead less
The sponge genome project and the evolution of multicellularity: using comparative genomics and developmental biology to reconstruct the first animals. Recently the entire genome from a living fossil - a sponge from the Great Barrier Reef - was sequenced (jointly supported by the ARC and US Department of Energy). As this genome is assembled and analysed, many of the fundamental biological processes that underlie the construction and evolution of all animals, including humans, will be revealed. ....The sponge genome project and the evolution of multicellularity: using comparative genomics and developmental biology to reconstruct the first animals. Recently the entire genome from a living fossil - a sponge from the Great Barrier Reef - was sequenced (jointly supported by the ARC and US Department of Energy). As this genome is assembled and analysed, many of the fundamental biological processes that underlie the construction and evolution of all animals, including humans, will be revealed. In addition, sponge genomics will fuel innovations in medicine and biotechnology. Specifically, sponges are renowned for their capacity to synthesise bioactive compounds used in drug development, and high-grade silica used for semi-conductor construction. This project will identify the gene networks controlling these biosynthetic processes.Read moreRead less
Simultaneous analysis of root-derived plant defences and the associated microbiome. Australia is dependent on sustainable agricultural yields, which need to be maintained or improved. This production capacity is currently under threat by new and existing diseases which are predicted to worsen with climate change. This project will provide a global picture of how disease resistance and soil microbial communities are causally linked, and provide new strategies for disease control. In doing so, it ....Simultaneous analysis of root-derived plant defences and the associated microbiome. Australia is dependent on sustainable agricultural yields, which need to be maintained or improved. This production capacity is currently under threat by new and existing diseases which are predicted to worsen with climate change. This project will provide a global picture of how disease resistance and soil microbial communities are causally linked, and provide new strategies for disease control. In doing so, it will develop intellectual property (IP) and infrastructure that can be used in soil health management. This will provide many benefits to Australia, including sustainable agriculture in the context of climate variability and an increased demand for food, biomaterials and biofuels.Read moreRead less
Does developmental noise have an epigenetic basis? One's ultimate phenotype is the result of a combination of genotype and environment, and includes a poorly understood component termed ?developmental noise?. The molecular basis of developmental noise remains unknown, but it appears to be established in early development and to be retained for the life of the organism. We propose that the molecular basis of developmental noise is the epigenetic state of the genome. The stochastic nature of th ....Does developmental noise have an epigenetic basis? One's ultimate phenotype is the result of a combination of genotype and environment, and includes a poorly understood component termed ?developmental noise?. The molecular basis of developmental noise remains unknown, but it appears to be established in early development and to be retained for the life of the organism. We propose that the molecular basis of developmental noise is the epigenetic state of the genome. The stochastic nature of the establishment of epigenetic state, combined with its heritability during mitosis, provides all the essential components for developmental noise. If our hypothesis proves correct, our work will have a major impact on the understanding of one of the most basic concepts in genetics.Read moreRead less