New tools to decipher, predict and manage pacific oyster mortality episodes. This project aims to unite cutting-edge genomic and molecular biological tools with novel quantitative modelling analyses to identify the mechanisms behind oyster disease events. Oyster farming contributes almost $100 million to the Australian economy each year and is a cornerstone of coastal communities, but has been decimated by diseases that threaten this important primary industry. While some causative pathogens hav ....New tools to decipher, predict and manage pacific oyster mortality episodes. This project aims to unite cutting-edge genomic and molecular biological tools with novel quantitative modelling analyses to identify the mechanisms behind oyster disease events. Oyster farming contributes almost $100 million to the Australian economy each year and is a cornerstone of coastal communities, but has been decimated by diseases that threaten this important primary industry. While some causative pathogens have been identified, the environmental catalysts of oyster disease remain a mystery. The expected outcome of this project is an innovative coupling of tools that provides new capacity to forecast disease events, delivering the Australian oyster industry a powerful platform to predict, manage and prevent costly disease outbreaks. By identifying environmental thresholds and oyster disease danger periods, an expected outcome of this project is the development of new oyster farming strategies aimed at avoiding multi-million dollar losses associated with disease outbreaks.Read moreRead less
Linkage Infrastructure, Equipment And Facilities - Grant ID: LE130100019
Funder
Australian Research Council
Funding Amount
$580,000.00
Summary
A transportable containerised laboratory for rapid cell sorting and high-resolution bioimaging of living aquatic microbes in field locations. This project will deliver a transportable, unique laboratory for the rapid isolation and high-resolution analysis of living microbes immediately after sampling from the sea or waterways. It will be the first of its kind in Australia and deliver new knowledge of the role of these organisms in their natural habitats.
The Role of the Single-Cell Environment in Microbial Invasion. This project aims to use a single-cell approach to develop a quantitative analysis of single-cell interactions to advance our understanding of complex bacterial behaviour fundamental to ecology, industry, technology and disease. Bacteria are ubiquitous on Earth and play key roles in nutrient cycles, biogeochemistry, pathogenesis, symbiosis and bioremediation among other processes. They exhibit complex behaviour and continuously invad ....The Role of the Single-Cell Environment in Microbial Invasion. This project aims to use a single-cell approach to develop a quantitative analysis of single-cell interactions to advance our understanding of complex bacterial behaviour fundamental to ecology, industry, technology and disease. Bacteria are ubiquitous on Earth and play key roles in nutrient cycles, biogeochemistry, pathogenesis, symbiosis and bioremediation among other processes. They exhibit complex behaviour and continuously invade animals, plants and new habitats. These behaviours are poorly understood in natural communities.Read moreRead less
Microbiology of a tropical creek impacted by sewage effluent: novel assessment using N-cycle functional markers and changes in community composition. Although most of Darwin Harbour has good water quality, there is much concern about local 'hot spots' where sewage has degraded ecosystem processes and values. As no bio-indicators of tropical marine water and sediment quality are known, the project will identify functional markers and microbial indicators of stress for integrated environmental mo ....Microbiology of a tropical creek impacted by sewage effluent: novel assessment using N-cycle functional markers and changes in community composition. Although most of Darwin Harbour has good water quality, there is much concern about local 'hot spots' where sewage has degraded ecosystem processes and values. As no bio-indicators of tropical marine water and sediment quality are known, the project will identify functional markers and microbial indicators of stress for integrated environmental monitoring.Read moreRead less
Biogeochemistry of ferruginous duricrusts. The project is focussed on the examination and application of microbial iron cycling in the formation of geologically stable, iron duricrusts in tropical regimes. The aim of the project is to develop a site-scale bioremediation strategy for iron ore mines by re-establishing canga, which are ‘ancient’ distinct ecosystems possessing unique plant species rarely found on Earth. This university-industry collaboration aims to produce economic benefits for the ....Biogeochemistry of ferruginous duricrusts. The project is focussed on the examination and application of microbial iron cycling in the formation of geologically stable, iron duricrusts in tropical regimes. The aim of the project is to develop a site-scale bioremediation strategy for iron ore mines by re-establishing canga, which are ‘ancient’ distinct ecosystems possessing unique plant species rarely found on Earth. This university-industry collaboration aims to produce economic benefits for the world’s iron mining industry through advanced training in mining-related research, and through the completion of the mining life cycle by site remediation, enhancing Australia’s position as a global leader in providing innovative solutions to today’s mining challenges.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE200100884
Funder
Australian Research Council
Funding Amount
$426,691.00
Summary
Do novel diets reshape wildlife microbiomes and resilience to stressors? This project aims to investigate how bacteria can assist wildlife in adapting to the accelerating threat of environmental change. Using an innovative, interdisciplinary approach this project expects to identify interactions between environmental change and the diet, microbial communities and stress resilience of wildlife, using the threatened Grey-headed flying fox as a model system. Expected outcomes include detailed under ....Do novel diets reshape wildlife microbiomes and resilience to stressors? This project aims to investigate how bacteria can assist wildlife in adapting to the accelerating threat of environmental change. Using an innovative, interdisciplinary approach this project expects to identify interactions between environmental change and the diet, microbial communities and stress resilience of wildlife, using the threatened Grey-headed flying fox as a model system. Expected outcomes include detailed understanding of the role of microbial communities in shaping wildlife adaptations and development of ecological interventions to enhance wildlife resilience in Australia and globally. Such outcomes may reveal opportunities for management strategies that safeguard threatened species and reduce human-wildlife conflicts.Read moreRead less
Biogeochemical remediation approaches for PFAS contaminated environments. This project aims to identify and harvest microorganisms capable of directly or indirectly affecting PFOS or PFOA degradation in the environment. Fluorinated compounds such as PFOS and PFOA in firefighting foams are contaminants of concern now routinely detected in contaminated groundwater and soil globally. Understanding the role of microorganisms, and the biogeochemical processes they perform in relation to fluorinated c ....Biogeochemical remediation approaches for PFAS contaminated environments. This project aims to identify and harvest microorganisms capable of directly or indirectly affecting PFOS or PFOA degradation in the environment. Fluorinated compounds such as PFOS and PFOA in firefighting foams are contaminants of concern now routinely detected in contaminated groundwater and soil globally. Understanding the role of microorganisms, and the biogeochemical processes they perform in relation to fluorinated compounds, will inform handling of contaminated sites and lead to development of cost effective and sustainable remediation technologies. Read moreRead less
Australia's freshwater ecosystems: how microbial diversity and functionality influence harmful cyanobacterial blooms. Toxic cyanobacterial blooms are a constant threat to safe drinking water supplies. A bloom is a poorly understood interaction between many species and the environment. This project will investigate the entire microbial population and their physiologies present in a bloom event in order to identify potential targets for their management.
Causes and consequences of disease in the habitat forming seaweed Ecklonia radiata. Despite compelling arguments for the increasing importance of disease as a key structuring force in marine communities, we know little about the causes or broad impact of disease for most natural marine systems. This is particularly true for kelp forests, the dominant community type on temperate rocky shores. This project will integrate field ecology with microbiology and modern environmental gene sequencing tech ....Causes and consequences of disease in the habitat forming seaweed Ecklonia radiata. Despite compelling arguments for the increasing importance of disease as a key structuring force in marine communities, we know little about the causes or broad impact of disease for most natural marine systems. This is particularly true for kelp forests, the dominant community type on temperate rocky shores. This project will integrate field ecology with microbiology and modern environmental gene sequencing techniques to characterise the frequency, causative agents and impact of disease on Ecklonia radiata, the dominant seaweed in Australia. This project will further investigate how environmental conditions, including human impacts, modulate disease in this key, habitat forming seaweed.Read moreRead less
Coastal permeable sediments as a novel source of greenhouse gases. Emissions of the greenhouse gases nitrous oxide and methane are increasing from unknown sources. High concentrations of these gases have been observed in coastal waters which bear the brunt of nutrient pollution (primarily nitrogen) from cities and agriculture. This project aims to investigate the sources of these gases within these environments and the processes that lead to their formation. This new knowledge is expected to ....Coastal permeable sediments as a novel source of greenhouse gases. Emissions of the greenhouse gases nitrous oxide and methane are increasing from unknown sources. High concentrations of these gases have been observed in coastal waters which bear the brunt of nutrient pollution (primarily nitrogen) from cities and agriculture. This project aims to investigate the sources of these gases within these environments and the processes that lead to their formation. This new knowledge is expected to develop new models which aim to enable us to better predict the emissions of greenhouse gases within coastal waters. Expected benefit of this will be strategies to reduce greenhouse gas emissions.Read moreRead less