Mechanisms of chronic infection, immunotolerance and coevolution in avian circovirus infections. This project will generate fundamental new knowledge into the pathogenesis of persistent, chronic viral diseases in a wide range of animal hosts. Furthermore, beak and feather disease virus is listed as a Key Threatening Process under the Endangered Species Protection Act (1992) to at least sixteen endangered Australian bird species. Very little is known about the host-virus interactions that occur d ....Mechanisms of chronic infection, immunotolerance and coevolution in avian circovirus infections. This project will generate fundamental new knowledge into the pathogenesis of persistent, chronic viral diseases in a wide range of animal hosts. Furthermore, beak and feather disease virus is listed as a Key Threatening Process under the Endangered Species Protection Act (1992) to at least sixteen endangered Australian bird species. Very little is known about the host-virus interactions that occur during the early stages of infection or why some birds recover yet others develop full blown disease. This project will provide new knowledge that can be used to counteract its effects on current and future endangered species recovery program.Read moreRead less
Understanding disease resistance gene evolution across the Brassicaceae. Pan genomes represent the diversity of a species, including structural and sequence variation, which cannot be provided by a reference genome alone. In this project we will characterise resistance gene diversity across the Brassicaceae pan genomes. Through comparison with resistance gene diversity in cultivated Brassica species we will understand selection underlying resistance gene evolution in wild species and subsequent ....Understanding disease resistance gene evolution across the Brassicaceae. Pan genomes represent the diversity of a species, including structural and sequence variation, which cannot be provided by a reference genome alone. In this project we will characterise resistance gene diversity across the Brassicaceae pan genomes. Through comparison with resistance gene diversity in cultivated Brassica species we will understand selection underlying resistance gene evolution in wild species and subsequent domestication and breeding. Knowledge on how variation affects disease susceptibility, especially to the devastating fungal pathogen blackleg, and contributes to phenotypic variation, will lead to improved plant protection strategies and increased crop resilience.Read moreRead less
The More the Merrier? Investigating copy number variation in Brassicas. This project intends to develop an understanding of how gene copy number variation affects disease susceptibility to help in the design of novel plant protection strategies. Gene copy number variants (CNVs) are segments of DNA that have been duplicated or lost in the genome of one individual or line with respect to another. CNVs have been shown to contribute significantly to phenotypic differences in humans, including diseas ....The More the Merrier? Investigating copy number variation in Brassicas. This project intends to develop an understanding of how gene copy number variation affects disease susceptibility to help in the design of novel plant protection strategies. Gene copy number variants (CNVs) are segments of DNA that have been duplicated or lost in the genome of one individual or line with respect to another. CNVs have been shown to contribute significantly to phenotypic differences in humans, including disease susceptibility, and the same seems to apply in plants. This project aims to apply the genome sequences for Brassica species to detect CNVs from re-sequencing data. Knowing how this variation affects an individual or line’s disease susceptibility, especially to the devastating fungal pathogen blackleg, could improve plant protection strategies and crop production.Read moreRead less
Alphaherpesvirus recombination: safety implications for attenuated Herpesvirus vaccines. Under certain conditions some herpesviruses, including mild vaccine strains, can recombine to generate virulent viruses. Following findings that this occurred naturally between Australian poultry vaccines, with devastating results, this project will study natural herpesvirus recombination with the aim of allowing vaccines to be used more safely.
Evaluating host-parasite interplay in individual tissues. The immune system of the host and the infecting parasite has coevolved into a sophisticated balance of power. This project will explore this balance using Schistosoma japonicum infection in sheep and determine immune mechanisms unleashed by the host in various tissues as well as the response of the parasite to these attacks.
The functional characterisation of a novel immune response in plants. This project aims to identify the role of pathogenicity-related-1 proteins in plants and characterise a new disease resistance pathway. By focusing on the interaction between key plant and pathogen proteins, this proposal seeks to advance the understanding of how the pathogen causes disease. The expected outcomes from these advances include the generation of new tools to manage plant diseases whilst building strong internation ....The functional characterisation of a novel immune response in plants. This project aims to identify the role of pathogenicity-related-1 proteins in plants and characterise a new disease resistance pathway. By focusing on the interaction between key plant and pathogen proteins, this proposal seeks to advance the understanding of how the pathogen causes disease. The expected outcomes from these advances include the generation of new tools to manage plant diseases whilst building strong international collaborations. This project should provide significant benefits for generating new leads for plant disease management leading to enhanced food security.Read moreRead less
Deciphering the molecular mechanisms of parasite-host interactions. The completion of genome projects for several helminths of veterinary significance has provided novel insights into the fundamentals of helminth biology. One outcome is the identification of microRNAs, a subclass of small regulatory RNAs which in plants and mammalian cells control diverse biological processes at the posttranscriptional level. We have discovered the presence of helminth miRNAs within host cells with the ability t ....Deciphering the molecular mechanisms of parasite-host interactions. The completion of genome projects for several helminths of veterinary significance has provided novel insights into the fundamentals of helminth biology. One outcome is the identification of microRNAs, a subclass of small regulatory RNAs which in plants and mammalian cells control diverse biological processes at the posttranscriptional level. We have discovered the presence of helminth miRNAs within host cells with the ability to mimic mammalian miRNAs to modulate innate immune responses. This project will discover how helminths hijack the mammalian miRNA machinery to regulate host gene expression and thus support long-term infection. The outcomes will highlight new avenues for the control of these persistent worm infections.Read moreRead less
Characterisation of a novel disease immunity pathway in plants. This project aims to understand the mechanisms by which the novel signalling molecule, CAPE1, contributes to
plant immunity. Studies to date have confirmed that CAPE1 inhibits plant diseases but it is unknown how. This
project aims to provide a seminal advance to the field by elucidating how the peptide is generated, how it is
perceived by the plant and the processes by which peptide contributes to plant defence. The expected outcom ....Characterisation of a novel disease immunity pathway in plants. This project aims to understand the mechanisms by which the novel signalling molecule, CAPE1, contributes to
plant immunity. Studies to date have confirmed that CAPE1 inhibits plant diseases but it is unknown how. This
project aims to provide a seminal advance to the field by elucidating how the peptide is generated, how it is
perceived by the plant and the processes by which peptide contributes to plant defence. The expected outcomes
of this project will include a detailed characterisation of a novel plant defence pathway as well the education and
training of next generation of plant scientists. Achieving these outcomes would provide the basis for new
innovative disease management strategies through the manipulation of this novel pathway.Read moreRead less
Molecular approaches to limit herpesvirus recombination. This project aims to generate safer attenuated herpesvirus vaccines for use in veterinary medicine by genetically manipulating the herpesvirus genome to reduce virus recombination. Recombination is recognised as a safety concern for a range of attenuated herpesvirus vaccines. This project is expected to generate viruses that have an impaired capacity to recombine with other viruses. These viruses will then be tested as candidate vaccines f ....Molecular approaches to limit herpesvirus recombination. This project aims to generate safer attenuated herpesvirus vaccines for use in veterinary medicine by genetically manipulating the herpesvirus genome to reduce virus recombination. Recombination is recognised as a safety concern for a range of attenuated herpesvirus vaccines. This project is expected to generate viruses that have an impaired capacity to recombine with other viruses. These viruses will then be tested as candidate vaccines for use in veterinary medicine. This offers a new approach to developing safer veterinary vaccines that will benefit our important animal industries.Read moreRead less
Virulence determinants influencing re-emergence of a complex RNA virus. This project intends to examine the effects that specific genes in naturally occurring recombinants have on their capacity to cause disease and spread between chickens. Coronaviruses are major pathogens of domestic animals throughout the world. Recurrent re-emergence of the coronavirus of chickens, infectious bronchitis virus, has been associated with recombination between wild type viruses and vaccine viruses, but the facto ....Virulence determinants influencing re-emergence of a complex RNA virus. This project intends to examine the effects that specific genes in naturally occurring recombinants have on their capacity to cause disease and spread between chickens. Coronaviruses are major pathogens of domestic animals throughout the world. Recurrent re-emergence of the coronavirus of chickens, infectious bronchitis virus, has been associated with recombination between wild type viruses and vaccine viruses, but the factors influencing this, and in particular the selective advantages genes from vaccine viruses confer on these recombinants, are unknown. The ultimate aim of the project is to identify both novel vaccines and alternative management strategies that might reduce the frequency of re-emergence of this virus and other coronaviruses.Read moreRead less