Arsenite oxidation by a novel bacterium that is a candidate for arsenic bioremediation. The arsenic munching microbe NT-26 could help in the fight to clean up arsenic-contaminated mining waste and drinking water. Arsenic poses an environmental problem in countries such as Australia, USA and Canada owing primarily to mining activities. The problem in countries such as Bangladesh and West Bengal are even more serious as these people are dying of arsenic-related diseases as they rely on water conta ....Arsenite oxidation by a novel bacterium that is a candidate for arsenic bioremediation. The arsenic munching microbe NT-26 could help in the fight to clean up arsenic-contaminated mining waste and drinking water. Arsenic poses an environmental problem in countries such as Australia, USA and Canada owing primarily to mining activities. The problem in countries such as Bangladesh and West Bengal are even more serious as these people are dying of arsenic-related diseases as they rely on water containing arsenic as their primary source of drinking water. The outcomes of this research should provide the necessary information for removing arsenic from all types of waters.Read moreRead less
Genetic variation without sex: frequency-dependent selection and the maintenance of variation in asexual organisms. The proposed research will gain insight into one of the most fundamental yet puzzling questions in evolutionary biology and determine the generality of frequency-dependent selection as a mechanism for maintaining variation in asexual organisms. The results will have broad appeal, both internationally and nationally, and will also provide insight into why most species reproduce sexu ....Genetic variation without sex: frequency-dependent selection and the maintenance of variation in asexual organisms. The proposed research will gain insight into one of the most fundamental yet puzzling questions in evolutionary biology and determine the generality of frequency-dependent selection as a mechanism for maintaining variation in asexual organisms. The results will have broad appeal, both internationally and nationally, and will also provide insight into why most species reproduce sexually. The results will also help in the development of two asexual species as environmental indicators by linking clones with specific environmental changes. These indicator clones could then be adopted by natural resource managers to monitor environmental pollution and contamination.Read moreRead less
Optimised distributed stimulation of muscle. The project aims to extend to humans, a method of producing a non-fatiguing, smooth, submaximal muscle contraction. The method using multiple electrodes, stimulated at different times, with those times being adjusted for optimum smoothness at low stimulation rates. This will enable the gathering of information about the mechanics of muscle undergoing near physiological contractions, which will be of interest to researchers in Biomechanics. It will ....Optimised distributed stimulation of muscle. The project aims to extend to humans, a method of producing a non-fatiguing, smooth, submaximal muscle contraction. The method using multiple electrodes, stimulated at different times, with those times being adjusted for optimum smoothness at low stimulation rates. This will enable the gathering of information about the mechanics of muscle undergoing near physiological contractions, which will be of interest to researchers in Biomechanics. It will also be a step towards the restoration of function to spinal cord injured patients.Read moreRead less
DNA Dynamics is Shear and Extensional Flows: Simulation and Single Molecule Experiments. The proposal seeks to establish a collaboration between Monash University and Stanford University in order to combine several recent experimental and theoretical advances that have been made by the individual groups in single molecule experimental techniques, extensional rheometry, and molecular rheology, to obtain new insights into the structure and dynamics of biopolymers. The central aim is to make a sign ....DNA Dynamics is Shear and Extensional Flows: Simulation and Single Molecule Experiments. The proposal seeks to establish a collaboration between Monash University and Stanford University in order to combine several recent experimental and theoretical advances that have been made by the individual groups in single molecule experimental techniques, extensional rheometry, and molecular rheology, to obtain new insights into the structure and dynamics of biopolymers. The central aim is to make a significant contribution towards bringing state-of-the-art techniques used for the characterization of polymeric systems to bear on the nature and origin of the elastic properties of biopolymers.Read moreRead less
The flow properties of proteins and other biopolymers. The living cell is an extraordinary organization with a vast variety of biomacromolecules carrying out myriads of functions with great specificity and accuracy. The key issue in cell biology is to unravel the structures of biopolymers and the deep connection that exists between structure and function. This interdisciplinary research program combines recent advances in experimental and theoretical rheology, with advances in protein science, t ....The flow properties of proteins and other biopolymers. The living cell is an extraordinary organization with a vast variety of biomacromolecules carrying out myriads of functions with great specificity and accuracy. The key issue in cell biology is to unravel the structures of biopolymers and the deep connection that exists between structure and function. This interdisciplinary research program combines recent advances in experimental and theoretical rheology, with advances in protein science, to investigate the response of biopolymers to deformation. This approach will lead to insights into the problem of protein folding, the interaction of biopolymers with surfaces, and the physical basis for the mechanical properties of biopolymers.Read moreRead less
Numerical simulation of the fish-like swimming of linked bodies. Although Zoologists have made detailed observations of swimming fish there are still many unanswered questions about how they swim. We do not know how the fins and undulating body work together to produce the high speed of the tuna, or the fast turns of a fish escaping danger. We see dolphins swim through the sea's surface but we don't know if they do that because it is much more efficient. This project is designed to simulate arb ....Numerical simulation of the fish-like swimming of linked bodies. Although Zoologists have made detailed observations of swimming fish there are still many unanswered questions about how they swim. We do not know how the fins and undulating body work together to produce the high speed of the tuna, or the fast turns of a fish escaping danger. We see dolphins swim through the sea's surface but we don't know if they do that because it is much more efficient. This project is designed to simulate arbitrary fish motion and give answers to these and other questions concerning swimming. It may also help humans to swim more efficiently and provide simulation tools for the design of robotic undersea vehicles.Read moreRead less
Reconstructing landscapes for biodiversity: From predictive modelling to future scenarios. Many landscapes around the world have been effectively denuded of natural vegetation, causing precipitous declines in native biodiversity. Mitigation of such effects in the near/medium-term future requires substantial ecological advice. We will employ our skills developed in modelling distributions of species across landscapes based on terrain, soils and climate to assess alternative landscape-reconstructi ....Reconstructing landscapes for biodiversity: From predictive modelling to future scenarios. Many landscapes around the world have been effectively denuded of natural vegetation, causing precipitous declines in native biodiversity. Mitigation of such effects in the near/medium-term future requires substantial ecological advice. We will employ our skills developed in modelling distributions of species across landscapes based on terrain, soils and climate to assess alternative landscape-reconstruction scenarios. This links use of existing data sets for initial modelling, a validation phase for testing model reliability and for refining models, and a subsequent GIS-based modelling phase in which alternative options for reconstructing landscapes are evaluated for their effectiveness in sustaining landscape-scale native biodiversity.Read moreRead less
Advanced fluid mechanics modelling of complex leukocyte-endothelial interactions. This project adopts an interdisciplinary approach toward understanding the mechanical interactions between blood cells and vessel walls, under different hydrodynamic conditions. Outcomes will have downstream benefits to vascular biology in relation to diagnosis of problems such as atherosclerotic plaques. These vascular problems are associated with several major health problems including coronary heart disease, h ....Advanced fluid mechanics modelling of complex leukocyte-endothelial interactions. This project adopts an interdisciplinary approach toward understanding the mechanical interactions between blood cells and vessel walls, under different hydrodynamic conditions. Outcomes will have downstream benefits to vascular biology in relation to diagnosis of problems such as atherosclerotic plaques. These vascular problems are associated with several major health problems including coronary heart disease, hypertension, stroke, diabetes and kidney dysfunction.Read moreRead less
Rapid Development of Biocompatible Stent Grafts for Aortic Aneurysms. Weakening of the aorta may cause an aneurysm. The present technique of its treatment involves replacing the weakened portion of the aorta with a synthetic graft. Failure of this treatment often occurs due to non-compatibility of the stent graft with natural aorta. One possible reason for this is a mismatch between elastic natural aorta and the non-elastic artificial graft. The core component of our project is the selection and ....Rapid Development of Biocompatible Stent Grafts for Aortic Aneurysms. Weakening of the aorta may cause an aneurysm. The present technique of its treatment involves replacing the weakened portion of the aorta with a synthetic graft. Failure of this treatment often occurs due to non-compatibility of the stent graft with natural aorta. One possible reason for this is a mismatch between elastic natural aorta and the non-elastic artificial graft. The core component of our project is the selection and development of a suitable biomaterial and optimization of the stent design based on hemodynamics flow analysis and its fabrication with the Fused Deposition Modelling (FDM) process.Read moreRead less
In Vitro Study of Hemodynamic Stresses and Endothelialization of Artificial Coronary Arteries. Restenosis (recurrence of the disease) is a major problem in the case of patients undergoing artificial artery by-pass surgery. Ideally the design for manufacturing the scaffold for cell adhesion of the artery should factor in hemodynamic forces and optimised geometry to withstand the hemodynamic stresses and other forces. This project aims to investigate the material for manufacturing the artificial a ....In Vitro Study of Hemodynamic Stresses and Endothelialization of Artificial Coronary Arteries. Restenosis (recurrence of the disease) is a major problem in the case of patients undergoing artificial artery by-pass surgery. Ideally the design for manufacturing the scaffold for cell adhesion of the artery should factor in hemodynamic forces and optimised geometry to withstand the hemodynamic stresses and other forces. This project aims to investigate the material for manufacturing the artificial artery using Fused Deposition Modeling and to develop methods for the establishment of endothelium on the artificial artery, concluding a restenosis-free solution for by-pass surgery. The knowledge gained through this work would be applicable to the design of other prosthetic devices.Read moreRead less