Hybridisation leading to lost sex: genomic and experimental insights. The project intends to apply advanced genomics to two classic Australian systems and quantitative genetics to one to address long-standing questions about why asexual reproduction is rare. It aims to test for rapid changes in genomes accompanying hybrid-origins of asexuals and whether this new diversity enables their ongoing evolution. The significance is that support for this hypothesis would challenge current theory for why ....Hybridisation leading to lost sex: genomic and experimental insights. The project intends to apply advanced genomics to two classic Australian systems and quantitative genetics to one to address long-standing questions about why asexual reproduction is rare. It aims to test for rapid changes in genomes accompanying hybrid-origins of asexuals and whether this new diversity enables their ongoing evolution. The significance is that support for this hypothesis would challenge current theory for why sex is so common. The expected outcome is to understand how variation is generated in natural populations with different ways of reproducing. Benefits would include significant contributions to global science, evolutionary training and potential applications in using hybridisation to manage threatened species or pests.Read moreRead less
Guiding principles and guardrails for genetic association studies. This project aims to investigate deep connections between genetic structure (population genetic processes, linkage disequilibrium and population structure) and the ability to statistically detect genetic variants responsible for variation in traits. The project expects to generate new knowledge in the areas of statistics, mathematics and biology through an innovative, multidisciplinary approach that synthesises and extends founda ....Guiding principles and guardrails for genetic association studies. This project aims to investigate deep connections between genetic structure (population genetic processes, linkage disequilibrium and population structure) and the ability to statistically detect genetic variants responsible for variation in traits. The project expects to generate new knowledge in the areas of statistics, mathematics and biology through an innovative, multidisciplinary approach that synthesises and extends foundational disciplinary results. Expected outcomes of this project include principles and methodology that underpin future genetic association studies by supplying a framework for interpreting results. This should provide significant benefits by reducing false conclusions and their associated costs.Read moreRead less
How are visual gene pathways lost and restored during reptile evolution? This project aims to investigate how complex traits are lost during evolution, and once lost if they can be regained. The project will use the diverse visual systems of snakes and lizards to shed light on the process of gene loss in degenerative lineages, and discover the mechanisms that compensate for gene losses in taxa with secondarily evolved visual capabilities- providing a case of evolutionary re-innovation in complex ....How are visual gene pathways lost and restored during reptile evolution? This project aims to investigate how complex traits are lost during evolution, and once lost if they can be regained. The project will use the diverse visual systems of snakes and lizards to shed light on the process of gene loss in degenerative lineages, and discover the mechanisms that compensate for gene losses in taxa with secondarily evolved visual capabilities- providing a case of evolutionary re-innovation in complex traits.Read moreRead less
5D Imaging Flow Cytometry for in vivo Quantification of Biological Fluids. Rapid and accurate quantification of live biological fluid properties at sub-cellular and molecular levels forms the bedrock of biofluidic sciences. Majority of the biofluidic devices rely on quantifying biological fluids after its removal from the body in an in vitro Flow Cytometer (FC). FC faces many caveats i.e. biological degradation and small volume etc. In this project, we shall engineer the first in vivo 5D imaging ....5D Imaging Flow Cytometry for in vivo Quantification of Biological Fluids. Rapid and accurate quantification of live biological fluid properties at sub-cellular and molecular levels forms the bedrock of biofluidic sciences. Majority of the biofluidic devices rely on quantifying biological fluids after its removal from the body in an in vitro Flow Cytometer (FC). FC faces many caveats i.e. biological degradation and small volume etc. In this project, we shall engineer the first in vivo 5D imaging flow cytometer (5D IFC) capable of continuous assessment of potentially entire blood volume in a living mice without removing fluid out of the body. The project represents a major advancement beyond any existing flow cytometer and overcome the engineering limits of state-of-art laser scanning imaging devices.Read moreRead less
Microbial community stability dynamics to environmental triggers. This project aims to advance our knowledge of the structural/functional dynamics of complex microbial communities by defining stability in response to environmental influences such as nutrient stress, pathogen invasion and antibiotics/chemicals. Using innovative microbial consortia modelling, to identify communities at risk of homeostatic disruption, we will develop and test pre-emptive microbial manipulation strategies for restor ....Microbial community stability dynamics to environmental triggers. This project aims to advance our knowledge of the structural/functional dynamics of complex microbial communities by defining stability in response to environmental influences such as nutrient stress, pathogen invasion and antibiotics/chemicals. Using innovative microbial consortia modelling, to identify communities at risk of homeostatic disruption, we will develop and test pre-emptive microbial manipulation strategies for restoring community stability. This project will yield significant global impact and economic/health benefit for humans and animals.Read moreRead less
Physiology of oxygen transport in the mammalian kidney. This project aims to improve understanding of oxygen regulation in renal tissue and knowledge of the physiology of the kidney. The mammalian kidney receives more oxygen than it uses or needs, and yet renal tissue is commonly found to be hypoxic. This project proposes that oxygen transport to the renal tissue is limited by blood vessel surface area. The project expects to generate anatomical data currently missing from the renal physiology c ....Physiology of oxygen transport in the mammalian kidney. This project aims to improve understanding of oxygen regulation in renal tissue and knowledge of the physiology of the kidney. The mammalian kidney receives more oxygen than it uses or needs, and yet renal tissue is commonly found to be hypoxic. This project proposes that oxygen transport to the renal tissue is limited by blood vessel surface area. The project expects to generate anatomical data currently missing from the renal physiology community, and potentially change the accepted story of oxygen homeostasis in the kidney. This will provide significant benefits, such as the provision of the foundational physiological science behind a determinant of kidney health and its flow-on impact to quality of life.Read moreRead less
The cellular basis of sex-specific responses to virus infection. This project aims to explore how the sex of cells impacts virus infections in culture. To date, the sex of cells in culture has been overlooked as an important source of biological variability, but may be found to affect basic science through to anti-viral drug discovery. Using a model in which a virus can be adapted to grow better in cells of a single sex, this project expects to generate new knowledge about how sex differences im ....The cellular basis of sex-specific responses to virus infection. This project aims to explore how the sex of cells impacts virus infections in culture. To date, the sex of cells in culture has been overlooked as an important source of biological variability, but may be found to affect basic science through to anti-viral drug discovery. Using a model in which a virus can be adapted to grow better in cells of a single sex, this project expects to generate new knowledge about how sex differences impact virus-host interactions. This project expects to provide new insights into sex-based differences in how cells detect and respond to virus infection, and the extent to which the sex of cells impacts viruses in general.Read moreRead less
Electrical properties of human dendrites. This project aims to determine the electrical properties of dendrites in human neurons. Dendrites are the primary site of synaptic input to neurons and their electrical properties play a key role in information processing in the brain. While we know much about the electrical properties of dendrites in other species, primarily rodents, little is known about the electrical properties of human dendrites. This project aims to address this gap in knowledge fo ....Electrical properties of human dendrites. This project aims to determine the electrical properties of dendrites in human neurons. Dendrites are the primary site of synaptic input to neurons and their electrical properties play a key role in information processing in the brain. While we know much about the electrical properties of dendrites in other species, primarily rodents, little is known about the electrical properties of human dendrites. This project aims to address this gap in knowledge for the first time. The results obtained will shed light on the mechanisms the brain uses to process information, and therefore will bring us a step closer to truly understanding ourselves.Read moreRead less
The fitness consequences of age-dependent changes in cognitive abilities. This project aims to investigate health-related topics in invasive fish. The evolution of large brains suggests that smarter individuals have more offspring due to natural and sexual selection. This project aims to test if the ability to perform cognitively challenging tasks predicts reproductive success. In addition, many life history traits show a trade-off between early and late life performance. This project will test ....The fitness consequences of age-dependent changes in cognitive abilities. This project aims to investigate health-related topics in invasive fish. The evolution of large brains suggests that smarter individuals have more offspring due to natural and sexual selection. This project aims to test if the ability to perform cognitively challenging tasks predicts reproductive success. In addition, many life history traits show a trade-off between early and late life performance. This project will test this prediction to see if individuals with above average cognitive performance when young are below average when old, that is faster 'cognitive senescence', or whether some individuals stay relatively smarter than others throughout their lives.Read moreRead less
Vocal mimicry in songbirds. Many of the world’s largest clade of birds - the songbirds - incorporate vocal mimicry in their songs, but while scientific interest in vocal mimicry dates from Aristotle, limited progress has been made. With our unique research program we aim to provide an empirically based, theoretically informed understanding of avian vocal mimicry. In an important advance, we will examine both sexes to test long-held male-centric assumptions about evolutionary origins and maintena ....Vocal mimicry in songbirds. Many of the world’s largest clade of birds - the songbirds - incorporate vocal mimicry in their songs, but while scientific interest in vocal mimicry dates from Aristotle, limited progress has been made. With our unique research program we aim to provide an empirically based, theoretically informed understanding of avian vocal mimicry. In an important advance, we will examine both sexes to test long-held male-centric assumptions about evolutionary origins and maintenance of this trait. Crucially, we focus on lineages found only in Australia and PNG, where songbirds originated, to develop a robust scientific understanding of vocal mimicry across the entire songbird clade, and so provide an important new perspective on why and how song began.Read moreRead less