Small is beautiful: Did gene-rich regions of mammal chromosomes evolve from microchromosomes? Most birds and reptile genomes feature many tiny microchromosomes. These are not junk, as previously thought, but contain most of the genes. Mammals lack microchromosomes, but contain gene-rich regions with similar attributes. We suggest that microchromosomes originated by genome duplication, and evolved into the gene-rich regions of mammalian chromosomes. We will test this hypothesis by comparing seque ....Small is beautiful: Did gene-rich regions of mammal chromosomes evolve from microchromosomes? Most birds and reptile genomes feature many tiny microchromosomes. These are not junk, as previously thought, but contain most of the genes. Mammals lack microchromosomes, but contain gene-rich regions with similar attributes. We suggest that microchromosomes originated by genome duplication, and evolved into the gene-rich regions of mammalian chromosomes. We will test this hypothesis by comparing sequences and genes in microchromosomes of birds, reptiles and monotremes. This will clarify the origin and evolution of the ?microgenome?, establish its suitability as a model for vertebrate genome organisation, and demonstrate whether microchromosomes are the ancestors of the gene-rich regions of mammalian chromosomes.Read moreRead less
Genetic control of floral architecture. Different flowers have different designs, and so the design must ultimately be controlled by genes. We have identified a gene that keeps sepals separate, and promotes the initiation of petals. We think it does this by a novel growth suppression mechanism, and will now deduce its molecular and cellular basis. This will help maintain Australia's strength in fundamental plant biology. Also, by understanding how sepals and petals arise in a model laboratory sp ....Genetic control of floral architecture. Different flowers have different designs, and so the design must ultimately be controlled by genes. We have identified a gene that keeps sepals separate, and promotes the initiation of petals. We think it does this by a novel growth suppression mechanism, and will now deduce its molecular and cellular basis. This will help maintain Australia's strength in fundamental plant biology. Also, by understanding how sepals and petals arise in a model laboratory species, we can generalise for many species, including economic plants. Thus it may be possible to make designer crops through targeted genetic changes to their floral structure.Read moreRead less
Control of plant organ development by the PETAL LOSS gene of Arabidopsis. We have discovered a new gene in the model laboratory plant Arabidopsis thaliana that is involved in sepal and petal development. It encodes a transcription factor that apparently acts by repressing growth in the inter-sepal zone of flowers where petals arise. We now aim to determine how this growth suppression occurs, and whether it extends to leaves where the gene is also expressed. Control of the initiation and sculptur ....Control of plant organ development by the PETAL LOSS gene of Arabidopsis. We have discovered a new gene in the model laboratory plant Arabidopsis thaliana that is involved in sepal and petal development. It encodes a transcription factor that apparently acts by repressing growth in the inter-sepal zone of flowers where petals arise. We now aim to determine how this growth suppression occurs, and whether it extends to leaves where the gene is also expressed. Control of the initiation and sculpturing of plant organs by site-specific inhibition of growth is a newly discovered mechanism that may be useful in manipulating plant architecture.Read moreRead less
Understanding how auxin and dorsoventral patterning are coordinated in plants. This study will help reveal for the first time how the outgrowth of leaves, flowers and floral organs is coordinated by tissue patterning genes and the plant growth hormone auxin. All plants grow in this way, and our findings, made using a model laboratory plant, will be applicable to crop species as well. Thus we will both expand our core knowledge of how multicellular organisms are constructed, and also generate pos ....Understanding how auxin and dorsoventral patterning are coordinated in plants. This study will help reveal for the first time how the outgrowth of leaves, flowers and floral organs is coordinated by tissue patterning genes and the plant growth hormone auxin. All plants grow in this way, and our findings, made using a model laboratory plant, will be applicable to crop species as well. Thus we will both expand our core knowledge of how multicellular organisms are constructed, and also generate possibilities for modifying the patterns of leaf and flower development in agricultural and horticultural species. Crops with larger leaves, or flowers of different structure, may result.Read moreRead less
Molecular and genetic analysis of epigenetic components in a model plant. Australia is a major exporter of agricultural food crops thus producers must maintain their competitive advantage in order to compete on the world stage. Food crops unfortunately have large, complex genomes that are not sequenced and a generation time of months that makes research outcomes slow to achieve. This project proposes to utilise a model plant that has a small completely sequenced genome and a short generation tim ....Molecular and genetic analysis of epigenetic components in a model plant. Australia is a major exporter of agricultural food crops thus producers must maintain their competitive advantage in order to compete on the world stage. Food crops unfortunately have large, complex genomes that are not sequenced and a generation time of months that makes research outcomes slow to achieve. This project proposes to utilise a model plant that has a small completely sequenced genome and a short generation time making it ideal to study the fundamental biological process of RNA silencing. Discoveries and outcomes from this project may have the potential to benefit Australian crops, ecosystems and human health.Read moreRead less
Engineered plant receptors as orthogonal neuronal switches. This project aims to develop synthetic biology methods to study brain function by utilising engineered plant receptors. This project will expand our ability to manipulate nerve cell function with high specificity and without side effects in freely behaving animals. Plant receptors will be developed into molecular tools in an iterative process that improves key properties using rational protein design. Expected outcomes include innovativ ....Engineered plant receptors as orthogonal neuronal switches. This project aims to develop synthetic biology methods to study brain function by utilising engineered plant receptors. This project will expand our ability to manipulate nerve cell function with high specificity and without side effects in freely behaving animals. Plant receptors will be developed into molecular tools in an iterative process that improves key properties using rational protein design. Expected outcomes include innovative and broadly-applicable neuroscience methods and an understanding of receptors involved in plant growth and defense. Benefits of this project include an enhanced capacity to generate knowledge, multidisciplinary training opportunities and patentable synthetic biology technologies.Read moreRead less
Instrumentation for the era of gravitational wave science. This project aims to study noise sources that limit the low-frequency performance of gravitational wave antenna: thermal noise, quantum radiation pressure noise and Newtonian noise. Gravitational wave detection is a new way in which to observe our universe. Although detectors such as advanced LIGO (Laser Interferometer Gravitational-Wave Observatory) should detect gravitational waves, further sensitivity improvement, particularly at low ....Instrumentation for the era of gravitational wave science. This project aims to study noise sources that limit the low-frequency performance of gravitational wave antenna: thermal noise, quantum radiation pressure noise and Newtonian noise. Gravitational wave detection is a new way in which to observe our universe. Although detectors such as advanced LIGO (Laser Interferometer Gravitational-Wave Observatory) should detect gravitational waves, further sensitivity improvement, particularly at low frequencies, will be needed to provide event rates necessary for astronomy. Expected project outcomes will support the development of the first free mass interferometer to operate at 120K using silicon optics, a vital facility for the world community. Pushing the boundaries of measurement may also drive innovation in optical sensing with potential applications in defence, security and exploration.Read moreRead less
Next generation nondestructive inspection using guided-wave mixing. This project aims to develop a novel approach for early damage detection. It relies on a systematic experimental investigation of nonlinear ultrasonic interaction between different input wave modes in the presence of damage, so as to identify optimal mode selections and operating parameters that will maximise the sensitivity to particular forms of structural damage. The effects of in-service loading on wave-mixing response, and ....Next generation nondestructive inspection using guided-wave mixing. This project aims to develop a novel approach for early damage detection. It relies on a systematic experimental investigation of nonlinear ultrasonic interaction between different input wave modes in the presence of damage, so as to identify optimal mode selections and operating parameters that will maximise the sensitivity to particular forms of structural damage. The effects of in-service loading on wave-mixing response, and non-contact detection suitable for hard-to-inspect surface conditions, will also be investigated. The new developments will help transform existing schedule-based maintenance practice to a condition-based maintenance paradigm, to achieve significant cost savings in maintenance.Read moreRead less
Plasma-soft tissue interactions: advancing a new era of plasma technologies. This project aims to develop the prerequisite knowledge to underpin new plasma technologies. Specifically, the project plans to provide new insight into the interaction between ionised gas plasma jets and biological soft tissue. It plans to use advanced analytical techniques and modelling simulations to investigate the physics of the plasma jet and processes occurring at the jet–tissue interface. It also plans to use (b ....Plasma-soft tissue interactions: advancing a new era of plasma technologies. This project aims to develop the prerequisite knowledge to underpin new plasma technologies. Specifically, the project plans to provide new insight into the interaction between ionised gas plasma jets and biological soft tissue. It plans to use advanced analytical techniques and modelling simulations to investigate the physics of the plasma jet and processes occurring at the jet–tissue interface. It also plans to use (bio)engineered tissue targets, chemical, biological and cellular assays to probe the transport and effects of plasma reactive species deep within tissue. This new knowledge would enable the development of new plasma sources and protocols for applications in health, medicine, biotechnology and manufacturing.Read moreRead less
Novel source of excited metastable atoms for Atom Trap Trace Analysis. This project aims to understand and to control light-induced processes in atoms by using finely shaped and tailored laser pulses, focusing on efficient production of excited metastable atoms. This is critical for efficient Atom Trap Trace Analysis, the most advanced technique for dating ground water and geological samples. Expected outcomes of this project include new and enhanced knowledge of physics of light-matter interact ....Novel source of excited metastable atoms for Atom Trap Trace Analysis. This project aims to understand and to control light-induced processes in atoms by using finely shaped and tailored laser pulses, focusing on efficient production of excited metastable atoms. This is critical for efficient Atom Trap Trace Analysis, the most advanced technique for dating ground water and geological samples. Expected outcomes of this project include new and enhanced knowledge of physics of light-matter interactions, developing an efficient, clean source of excited metastable atoms, and integrating that source into the Australian National Facility for dating geological samples. This should provide significant benefits, such as significant improvement of operational efficiency and productivity of that facility.Read moreRead less