Hydrogen Abstraction in Chemical, Biochemical and Polymerization Processes. Hydrogen-abstraction reactions are of vital importance in the chemical, biochemical and polymerization processes that occur in everyday life. The objective of the proposed research is to improve our understanding of such reactions. State-of-the-art quantum chemistry calculations will be used to examine a broad range of hydrogen-abstraction reactions, and to obtain accurate information about the factors that influence suc ....Hydrogen Abstraction in Chemical, Biochemical and Polymerization Processes. Hydrogen-abstraction reactions are of vital importance in the chemical, biochemical and polymerization processes that occur in everyday life. The objective of the proposed research is to improve our understanding of such reactions. State-of-the-art quantum chemistry calculations will be used to examine a broad range of hydrogen-abstraction reactions, and to obtain accurate information about the factors that influence such reactions. Building on this work, more detailed case studies will be performed in two important areas: the hydrogen-abstraction steps in biochemical reactions mediated by coenzyme B12, and chain-transfer processes in conventional and controlled free-radical polymerization.Read moreRead less
Exploiting the self-assembly of hydrophobin proteins to engineer functional nanostructuring surfaces. There is an increasing world-wide demand for advanced nano-biomaterials with novel properties. We will use natural hydrophobin proteins to coat nanodevices and make them more compatible with biological systems. Hydrophobin coatings will be applicable to biosensors, medical devices, diagnostics and drug delivery systems. The research will lead to an understanding of the basic mechanisms of protei ....Exploiting the self-assembly of hydrophobin proteins to engineer functional nanostructuring surfaces. There is an increasing world-wide demand for advanced nano-biomaterials with novel properties. We will use natural hydrophobin proteins to coat nanodevices and make them more compatible with biological systems. Hydrophobin coatings will be applicable to biosensors, medical devices, diagnostics and drug delivery systems. The research will lead to an understanding of the basic mechanisms of protein self-assembly and will have application outcomes that contribute to Australia being an important player in the field of nanotechnology. This is critical for Australia's long term competitiveness and productivity in and beyond the 21st century.Read moreRead less
Novel Scanning Electrochemical Microscopy applications in molecular, supramolecular electrochemistry and biological systems. Improved understanding of chemical reactivity in natural and artificial molecular systems and acquisition of a wider perspective of electron transfer processes are two important challenges in chemistry and biology. Through this well defined research project, the CI, jointly with the host facility, has the skills to achieve valuable new insights. This project will expand Au ....Novel Scanning Electrochemical Microscopy applications in molecular, supramolecular electrochemistry and biological systems. Improved understanding of chemical reactivity in natural and artificial molecular systems and acquisition of a wider perspective of electron transfer processes are two important challenges in chemistry and biology. Through this well defined research project, the CI, jointly with the host facility, has the skills to achieve valuable new insights. This project will expand Australia's knowledge base and research capability and open new scenarios for frontier technologies and advanced materials. This project will introduce the SECM methods into Australia. The foreseen benefits include technology exchange and contribution to fundamental and applied science.Read moreRead less
Enabling Technologies for Motion Corrected Positron Emission Tomography (PET) of Unanaesthetized Laboratory Animals. Small animal molecular imaging is a powerful tool in biological research and drug discovery. Anaesthesia is routinely used to avoid motion distortion, but can profoundly alter the biological process studied. This research will enable quantitative imaging of neurobiological phenomena in awake laboratory animals. It will create new opportunities for Australian basic researchers to ....Enabling Technologies for Motion Corrected Positron Emission Tomography (PET) of Unanaesthetized Laboratory Animals. Small animal molecular imaging is a powerful tool in biological research and drug discovery. Anaesthesia is routinely used to avoid motion distortion, but can profoundly alter the biological process studied. This research will enable quantitative imaging of neurobiological phenomena in awake laboratory animals. It will create new opportunities for Australian basic researchers to use innovative technology with expected high economic potential, and benefit small biotech companies by facilitating pre-clinical and clinical development of new pharmaceuticals. The new motion tracking and image reconstruction technologies developed will strengthen Australia's leading position in engineering and biomedical systems development.Read moreRead less
Manipulating the self-assembly properties of fungal hydrophobin proteins for the design of novel biological polymers. Hydrophobin-based products will be novel biocompatible and biodegradable products with applications in the fields of medical implants, biosensors, detergents, coatings and pharmaceutical and industrial emulsions. They have the potential to directly improve the lives of all Australians and to be of benefit to the Australian economy and environment. This collaborative research pro ....Manipulating the self-assembly properties of fungal hydrophobin proteins for the design of novel biological polymers. Hydrophobin-based products will be novel biocompatible and biodegradable products with applications in the fields of medical implants, biosensors, detergents, coatings and pharmaceutical and industrial emulsions. They have the potential to directly improve the lives of all Australians and to be of benefit to the Australian economy and environment. This collaborative research project will enable Australian scientists to gain from working with a multinational company and to acquire skills in the rapidly expanding fields of structural and molecular biology. The University of Sydney will own any intellectual property arising from this work and will benefit from the commercialisation of hydrophobin-based products.Read moreRead less
Allosteric regulation, molecular structure and function of transglutaminase 2. With Australia's ageing population, we can expect to see increasing prevalence of pathologies such as cancer, Alzheimer's disease, and cataracts. The ubiquitous enzyme transglutaminase 2 (TG2) has been implicated in all of these age-related diseases, as well as in chronic disorders such as coeliac disease and diabetes, and may contribute in a positive way to wound healing. Understanding how TG2 is activated and inac ....Allosteric regulation, molecular structure and function of transglutaminase 2. With Australia's ageing population, we can expect to see increasing prevalence of pathologies such as cancer, Alzheimer's disease, and cataracts. The ubiquitous enzyme transglutaminase 2 (TG2) has been implicated in all of these age-related diseases, as well as in chronic disorders such as coeliac disease and diabetes, and may contribute in a positive way to wound healing. Understanding how TG2 is activated and inactivated, and how it selects its targets, will be a critical addition to current knowledge of this enzyme, and will be an essential prerequisite for the development of TG2-targetted drugs and other TG2-related therapies.Read moreRead less
Guarding and evolving the genome: interactions between DNA-repair enzymes and damaged DNA. The application of structural biology techniques to the area of DNA repair allows us to understand the full implications linking genes and proteins to the molecular mechanisms of diseases such as cancer and hereditory conditions. Studies in this highly internationally competitive area are already established in the Bond laboratory, which has recently relocated to Australia. The use of forward-thinking stru ....Guarding and evolving the genome: interactions between DNA-repair enzymes and damaged DNA. The application of structural biology techniques to the area of DNA repair allows us to understand the full implications linking genes and proteins to the molecular mechanisms of diseases such as cancer and hereditory conditions. Studies in this highly internationally competitive area are already established in the Bond laboratory, which has recently relocated to Australia. The use of forward-thinking structural biology approaches to solve difficult technical problems will foster collaborations within Australia and with leading laboratories abroad, providing excellent up-to-date research training for students and postdoctoral researchers.
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High resolution single particle analysis of biological macromolecules. One of the great challenges of cell biology is to increase the rate of atomic resolution structure determination, particularly of membrane proteins and macromolecular assemblies. The current rate-limiting step is high quality crystal production. Our goal is to prove that protein structures can be determined to atomic resolution by single-particle analysis. 3D structures will be produced by computationally aligning high-resolu ....High resolution single particle analysis of biological macromolecules. One of the great challenges of cell biology is to increase the rate of atomic resolution structure determination, particularly of membrane proteins and macromolecular assemblies. The current rate-limiting step is high quality crystal production. Our goal is to prove that protein structures can be determined to atomic resolution by single-particle analysis. 3D structures will be produced by computationally aligning high-resolution electron microscope images of individual, randomly oriented molecules. The importance of this project is highlighted by the fact over 120,000 protein sequences are already databased, a number set to increase rapidly as new genome sequencing projects are completed.
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Gain modulation and stability in biological neural systems. This project is relevant to the National Research Priority area of Frontier Technologies and addresses fundamental cross-disciplinary issues of control and information processing in large, distributed neural systems that are at the cutting edge of intelligent processing systems. Applications are in rapidly growing fields of robotics, machine learning, adaptive control and intelligent systems, all with applications in diverse areas of ec ....Gain modulation and stability in biological neural systems. This project is relevant to the National Research Priority area of Frontier Technologies and addresses fundamental cross-disciplinary issues of control and information processing in large, distributed neural systems that are at the cutting edge of intelligent processing systems. Applications are in rapidly growing fields of robotics, machine learning, adaptive control and intelligent systems, all with applications in diverse areas of economic importance. Applications to cochlear implant speech processing will provide benefit for the hearing impaired. The project will provide students with training at an international level within Australia, thus helping ensure Australia maintains and extends its science and technology base into the futureRead moreRead less
The mechanism of water splitting in photosynthesis. Sunlight reaching the earth is used by the vast body of plants and algae living in surface waters and on the land to drive photosynthesis. One of the most fundamental contributions that photosynthesis provides to the Biosphere is the gaseous oxygen produced by its water-splitting chemistry - ~300 gigatons of O2 are released into the atmosphere per year. However, the mechanism behind water-splitting is not precisely known. We will use a range o ....The mechanism of water splitting in photosynthesis. Sunlight reaching the earth is used by the vast body of plants and algae living in surface waters and on the land to drive photosynthesis. One of the most fundamental contributions that photosynthesis provides to the Biosphere is the gaseous oxygen produced by its water-splitting chemistry - ~300 gigatons of O2 are released into the atmosphere per year. However, the mechanism behind water-splitting is not precisely known. We will use a range of unique experimental approaches to determine the molecular mechanism of the photosynthetic water-splitting chemistry. The understanding of this reaction will provide the molecular blueprint for the development of efficient biocatalysts to generate H2 and O2 from water.Read moreRead less