Enhancing Genomic Prediction for Changing Environments in Wheat. Adverse weather is the primary risk faced by the Australian agriculture industry. This Project aims to develop the next generation of agriculture tools to unlock natural potential in wheat and improve yield stability across seasons and regions. Drawing on crop physiology, genetics and integrated modelling, this Project expects to generate new knowledge and technologies to untangle genetic and environmental interactions that affect ....Enhancing Genomic Prediction for Changing Environments in Wheat. Adverse weather is the primary risk faced by the Australian agriculture industry. This Project aims to develop the next generation of agriculture tools to unlock natural potential in wheat and improve yield stability across seasons and regions. Drawing on crop physiology, genetics and integrated modelling, this Project expects to generate new knowledge and technologies to untangle genetic and environmental interactions that affect productivity, enhance predictive capability, and initiate advanced breeding strategies to develop new crop varieties with superior resilience against changing climates. This should provide significant benefits, such as profit stability for wheat growers, elevated global market position and improved food security.Read moreRead less
Development of genetic technology for rodent population suppression. Vertebrate pests cost Australia over $1 billion each year in agricultural losses and environmental damage and novel strategies are urgently required to tackle this massive challenge. Newly proposed “gene drives”, which might rapidly spread through populations, have enormous potential for the sustained management and even eradication of pests. Through innovative application of cutting-edge genome editing approaches, this proposa ....Development of genetic technology for rodent population suppression. Vertebrate pests cost Australia over $1 billion each year in agricultural losses and environmental damage and novel strategies are urgently required to tackle this massive challenge. Newly proposed “gene drives”, which might rapidly spread through populations, have enormous potential for the sustained management and even eradication of pests. Through innovative application of cutting-edge genome editing approaches, this proposal aims to develop gene drive technology in mice as a prototypical vertebrate pest species. We will also develop cutting-edge mathematical models of rodent gene drives to identify crucial parameters for efficacious employment and investigate potential for impact on non-target populations.Read moreRead less
Fisheries genomics of snapper in Australia and New Zealand Waters. This industry-driven project aims to assemble a strategic research alliance to generate and apply knowledge to a highly significant fisheries resource. It involves collaboration between the five major state government fisheries agencies in Australia, the New Zealand’s Crown Research Institute for seafood and two Australian labs with leadership in fish genetics and genomics. It expects to generate and integrate genomic, environmen ....Fisheries genomics of snapper in Australia and New Zealand Waters. This industry-driven project aims to assemble a strategic research alliance to generate and apply knowledge to a highly significant fisheries resource. It involves collaboration between the five major state government fisheries agencies in Australia, the New Zealand’s Crown Research Institute for seafood and two Australian labs with leadership in fish genetics and genomics. It expects to generate and integrate genomic, environmental and phenotypic datasets for snapper populations from across vast coastal regions of the two countries. The outcomes should substantially enhance intra- and inter-jurisdictional fisheries management and aquaculture initiatives, providing commercial, social and environmental benefits for many stakeholders.Read moreRead less
Genomes on islands: Improving management of Australia's threatened mammals. This project aims to improve the management of endangered mammals by combining data on genomic and morphological variation with results from conservation translocations. Using new genomics methods, the project will measure the effects of small population size on genetic diversity and mutation load, in extinct as well as remnant and translocated populations. The project will monitor seven intensively managed marsupial spe ....Genomes on islands: Improving management of Australia's threatened mammals. This project aims to improve the management of endangered mammals by combining data on genomic and morphological variation with results from conservation translocations. Using new genomics methods, the project will measure the effects of small population size on genetic diversity and mutation load, in extinct as well as remnant and translocated populations. The project will monitor seven intensively managed marsupial species to better understand how to mix populations for fauna restoration projects. This project should improve methods to promote species recovery in Australia and globally.Read moreRead less
Using fire to manage biodiversity in fragmented landscapes. Using fire to manage biodiversity in fragmented landscapes. This project intends to develop a conservation management tool for use in fire-prone fragmented landscapes to reverse biodiversity loss. It will address two critical knowledge gaps: the combined effects of fire and fragmentation on animal movement, and the implications of current and future fire regimes for native animal populations. Land-use change has severely fragmented 40% ....Using fire to manage biodiversity in fragmented landscapes. Using fire to manage biodiversity in fragmented landscapes. This project intends to develop a conservation management tool for use in fire-prone fragmented landscapes to reverse biodiversity loss. It will address two critical knowledge gaps: the combined effects of fire and fragmentation on animal movement, and the implications of current and future fire regimes for native animal populations. Land-use change has severely fragmented 40% of Australia’s natural landscapes, resulting in loss of habitat for native biodiversity. Remaining habitat fragments are at risk from increases in the frequency and intensity of fire, which also threatens biodiversity. The anticipated outcome is a conservation management tool that is readily transferable to any fire-prone system.Read moreRead less
Genomics and mixed source populations in wildlife translocations. Translocation is a conservation strategy to help the plight of endangered species, and is becoming increasing important to mitigate against climate change. However translocations often fail. Theory suggests mixing individuals from different source populations would benefit species' genomic diversity and potentially success rates, however this is untested in animals. Also unclear is what parts of the genome are important for mitiga ....Genomics and mixed source populations in wildlife translocations. Translocation is a conservation strategy to help the plight of endangered species, and is becoming increasing important to mitigate against climate change. However translocations often fail. Theory suggests mixing individuals from different source populations would benefit species' genomic diversity and potentially success rates, however this is untested in animals. Also unclear is what parts of the genome are important for mitigating against climate change. Using an endangered lizard model, this project aims to understand how to best start new populations by 1) providing the first empirical test in terrestrial vertebrates of using mixed source populations; and 2) uncovering regions of the genome important for considering in translocations.Read moreRead less
Designing successful genetic-rescue approaches for threatened species. This project aims to determine how threatened populations of inbred native species can be 'genetically rescued' by introducing genetically healthy individuals. This is significant because Australia is a global hotspot of extinctions and threatened species, so tools that can be used to offset extinction risk will benefit entire ecosystems at risk. We will focus on two inbred populations of koalas in South Australia to (1) meas ....Designing successful genetic-rescue approaches for threatened species. This project aims to determine how threatened populations of inbred native species can be 'genetically rescued' by introducing genetically healthy individuals. This is significant because Australia is a global hotspot of extinctions and threatened species, so tools that can be used to offset extinction risk will benefit entire ecosystems at risk. We will focus on two inbred populations of koalas in South Australia to (1) measure and map patterns of genetic diversity, (2) map densities and track individuals to measure demography, (3) develop advanced spatial models that combine population demography and genetic processes to predict the effectiveness of genetic rescue, and (4) source and rear healthy individuals to test our predictions.Read moreRead less