Transcription factors find their targets by reading the epigenetic code. This project aims to elucidate how transcription factors, proteins that regulate gene expression, find their target genes. The hypothesis is that non-DNA binding domains play an essential role in this process. This project expects to transform our understanding of transcription factor families, and how factors in families with the same DNA-binding domain manage to regulate different genes. Expected outcomes of this project ....Transcription factors find their targets by reading the epigenetic code. This project aims to elucidate how transcription factors, proteins that regulate gene expression, find their target genes. The hypothesis is that non-DNA binding domains play an essential role in this process. This project expects to transform our understanding of transcription factor families, and how factors in families with the same DNA-binding domain manage to regulate different genes. Expected outcomes of this project include revealing how accessory proteins help transcription factors identify their targets in the genome by reading epigenetic marks. This should provide significant benefits including improved design of artificial transcription factors to up- or down-regulate specific genes in research and agriculture.Read moreRead less
ARC Centre for Kangaroo Genome. In this Australian-led Kangaroo Genome Project, we will map and characterize the tammar wallaby genome at the molecular level. Marsupial genomes are uniquely valuable because they provide comparisons that reveal new human genes, regulatory sequences and marsupial-specific genes. These will deliver new products and information useful for medicine, industry, agriculture and conservation. We will construct integrated genetic and physical maps of the genome, clone the ....ARC Centre for Kangaroo Genome. In this Australian-led Kangaroo Genome Project, we will map and characterize the tammar wallaby genome at the molecular level. Marsupial genomes are uniquely valuable because they provide comparisons that reveal new human genes, regulatory sequences and marsupial-specific genes. These will deliver new products and information useful for medicine, industry, agriculture and conservation. We will construct integrated genetic and physical maps of the genome, clone the whole genome as large inserts in BAC vectors, and build a "golden path" with minimal overlap. We will construct libraries of expressed genes from tammar tissues and array them for use in analysing gene expression.Read moreRead less
Uniting histone and transcription factor codes. This project aims to establish the general features of the “histone code”. It is well established that gene expression patterns are determined in part by the deposition, recognition and removal of post-translational modifications on the histone proteins that package eukaryotic DNA. This project proposes that this "histone code" is in fact a specific example of a transcription factor code. The project aims to enhance our understanding of the mechani ....Uniting histone and transcription factor codes. This project aims to establish the general features of the “histone code”. It is well established that gene expression patterns are determined in part by the deposition, recognition and removal of post-translational modifications on the histone proteins that package eukaryotic DNA. This project proposes that this "histone code" is in fact a specific example of a transcription factor code. The project aims to enhance our understanding of the mechanisms underlying gene regulation in plants and animals, and help to create improved strategies to optimise crop and farm animal properties and new-generation therapeutics.Read moreRead less
Designer DNA-binding factors. This project aims to use a natural transcription factor family to enhance the efficiency and functionality of designer DNA-binding factors. Research into the structure and function of zinc finger transcription factors, TAL effectors and CRISPR created designer DNA-binding factors. However, though research has improved the specificity of these factors’ genome-wide binding, their efficacy in regulating the expression of genes requires improvement. Using sequencing, th ....Designer DNA-binding factors. This project aims to use a natural transcription factor family to enhance the efficiency and functionality of designer DNA-binding factors. Research into the structure and function of zinc finger transcription factors, TAL effectors and CRISPR created designer DNA-binding factors. However, though research has improved the specificity of these factors’ genome-wide binding, their efficacy in regulating the expression of genes requires improvement. Using sequencing, the project intends to enhance the efficiency and function of these factors by designing modules to improve the stability of DNA binding and effectiveness in functionally regulating gene expression. The project outcomes could include knowledge enabling the use of genetically engineered DNA-binding proteins to artificially control gene expression, with significant scientific and economic implications.Read moreRead less
Genetic, Cellular and Molecular Analysis of Cardiac Ventricular Septation. The project aims to define the blueprint for ventricular septation in the mammalian heart – how, during heart development, a single ventricle becomes divided in two by a muscular wall, thus creating left and right pumps and electrical circuits serving the body and lung circulations separately. A proprietary mouse genetic model was created and will be used to probe the cellular and molecular mechanisms of septation using n ....Genetic, Cellular and Molecular Analysis of Cardiac Ventricular Septation. The project aims to define the blueprint for ventricular septation in the mammalian heart – how, during heart development, a single ventricle becomes divided in two by a muscular wall, thus creating left and right pumps and electrical circuits serving the body and lung circulations separately. A proprietary mouse genetic model was created and will be used to probe the cellular and molecular mechanisms of septation using new technologies able to resolve biology at a single-cell level. Outcomes may include new knowledge on heart development and evolution, including how the cardiac electrical system is formed, and how cell boundaries and tissue complexity are generated. The project may advance new technologies and create new data resources.Read moreRead less
Improving the efficiency of CRISPR gene editing in cells. Human red blood cells are well-characterised and the globin gene locus is a model system for the study of gene regulation. Gene editing technologies and delivery tools are evolving rapidly and the globin gene locus is the perfect model for gene editing optimisation. This collaboration between UNSW Sydney and CSL aims to bring together our combined expertise and new technologies to develop an optimal platform for genetic modification in a ....Improving the efficiency of CRISPR gene editing in cells. Human red blood cells are well-characterised and the globin gene locus is a model system for the study of gene regulation. Gene editing technologies and delivery tools are evolving rapidly and the globin gene locus is the perfect model for gene editing optimisation. This collaboration between UNSW Sydney and CSL aims to bring together our combined expertise and new technologies to develop an optimal platform for genetic modification in a red blood cell line. Simultaneously, this project aims to generate fundamental insights into mechanisms of human gene regulation. The technological and biological outcomes of this project will be of benefit for future gene editing applications.Read moreRead less
Developing auxetic composite system for protective engineering applications. This project intends to explore the possibilities of extending the latest developments in auxetic technologies to the protective design of engineering structures. Auxetic materials become thicker perpendicular to the applied force when stretched. Specifically, the project plans to develop a novel auxetic composite system with a focus on protecting civil and defence infrastructure from extreme loads. It is expected that ....Developing auxetic composite system for protective engineering applications. This project intends to explore the possibilities of extending the latest developments in auxetic technologies to the protective design of engineering structures. Auxetic materials become thicker perpendicular to the applied force when stretched. Specifically, the project plans to develop a novel auxetic composite system with a focus on protecting civil and defence infrastructure from extreme loads. It is expected that the system’s superior energy dissipating capability will broaden its application beyond civil infrastructure, such as armoured vehicles, protective sports gear and body armour. The project also plans to develop a multiscale numerical modelling and topological optimisation framework to accelerate the adoption of this advanced composite system.Read moreRead less
Discovery Early Career Researcher Award - Grant ID: DE220100876
Funder
Australian Research Council
Funding Amount
$413,000.00
Summary
Smart Optimisation of Functionally Graded Porous Structures. This project aims to develop a novel smart optimisation method for shaping the porosity geometries of metal foams for design requirements. Although these functionally graded porous structures have superior engineering properties, efficient examination methods to understand the mechanical behaviour of irregular graded porosities are lacking. Expected outcomes of this project include the expansion of fundamental knowledge in porous media ....Smart Optimisation of Functionally Graded Porous Structures. This project aims to develop a novel smart optimisation method for shaping the porosity geometries of metal foams for design requirements. Although these functionally graded porous structures have superior engineering properties, efficient examination methods to understand the mechanical behaviour of irregular graded porosities are lacking. Expected outcomes of this project include the expansion of fundamental knowledge in porous media and new technologies to build stronger and lighter multifunctional structural components. The project will provide significant benefits, including enhanced manufacturing capacities of local industries to fabricate metal foam products, new job opportunities in a growing market, and less carbon emissions.Read moreRead less
Multi-Scale Model-Based Simulation of Glass Fragmentation under Blast Loading. It is estimated that most injuries from bomb blasts can be attributed to airborne sharp glass fragments. The proposed project will help us gain better understanding of glass failure mechanism under impact/blast loading. The results from the proposed project are expected to help in developing more effective blast-resistant transparency, ensuring the reliability and quality of buildings and facilities, mitigating injury ....Multi-Scale Model-Based Simulation of Glass Fragmentation under Blast Loading. It is estimated that most injuries from bomb blasts can be attributed to airborne sharp glass fragments. The proposed project will help us gain better understanding of glass failure mechanism under impact/blast loading. The results from the proposed project are expected to help in developing more effective blast-resistant transparency, ensuring the reliability and quality of buildings and facilities, mitigating injury or death due to flying glass fragments, and eventually enhancing public safety and security.Read moreRead less
Thin Films of Oxide Ceramics. Aluminium oxide films are used extensively in the Australian industries of Protective & Decorative Coatings (examples include door-knobs and cutting-tools). The industry will be offered a remarkably simple process for preparation of high quality films. In the microelectronic industry, the uses of aluminium oxide films as a dielectric alternative to silicon dioxide has just started to emerge world - wide and this new process would make a dramatic impact with commerci ....Thin Films of Oxide Ceramics. Aluminium oxide films are used extensively in the Australian industries of Protective & Decorative Coatings (examples include door-knobs and cutting-tools). The industry will be offered a remarkably simple process for preparation of high quality films. In the microelectronic industry, the uses of aluminium oxide films as a dielectric alternative to silicon dioxide has just started to emerge world - wide and this new process would make a dramatic impact with commercial benefits for Australia. Read moreRead less