Seeing without eyes: the evolution of non-visual photoreceptors in vertebrates. Australia's underwater biodiversity is second to none with endemic species representing the earliest stages in vertebrate evolution, many of them relying heavily on vision for survival. Tracing the evolution of light detection and image formation will provide crucial information about the lifestyles of our vertebrate ancestors, the environmental selection pressures driving speciation and colour communication. Charact ....Seeing without eyes: the evolution of non-visual photoreceptors in vertebrates. Australia's underwater biodiversity is second to none with endemic species representing the earliest stages in vertebrate evolution, many of them relying heavily on vision for survival. Tracing the evolution of light detection and image formation will provide crucial information about the lifestyles of our vertebrate ancestors, the environmental selection pressures driving speciation and colour communication. Characterisation of optimal light environments and extra-ocular light detection will also help protect and manage endemic species in wild and captive environments. Read moreRead less
Do larval fish leave the reef to avoid parasites? Although fundamental to understanding the community structure of reef fishes, why fish larvae migrate to the open ocean remains controversial. Traditional explanations are that it results in dispersal, avoidance of predators, and increased food. Recent work on the Great Barrier Reef, however, suggests avoiding reef-based micropredatory parasites may be more important. To determine if this so, we will investigate the effect of parasites on larval ....Do larval fish leave the reef to avoid parasites? Although fundamental to understanding the community structure of reef fishes, why fish larvae migrate to the open ocean remains controversial. Traditional explanations are that it results in dispersal, avoidance of predators, and increased food. Recent work on the Great Barrier Reef, however, suggests avoiding reef-based micropredatory parasites may be more important. To determine if this so, we will investigate the effect of parasites on larval fish condition, performance, and susceptibility to micropredators; whether larval fish are vulnerable to reef-based micropredators; the effects of micropredators on fish settlement patterns; and whether larval fish that don't migrate have adaptations to avoid micropredators.Read moreRead less
The cost of a meal: life-history consequences of foraging mode in fur seals and sea lions. Australia's two fur seal species are currently experiencing population increases throughout their range as they recover from the over-exploitation of the commercial sealing era (18-19th centuries) whereas the Australian sea lion population is decreasing (or stable but low) throughout its range and is considered vulnerable. Understanding the mechanisms which determine foraging efficiency in fur seals and s ....The cost of a meal: life-history consequences of foraging mode in fur seals and sea lions. Australia's two fur seal species are currently experiencing population increases throughout their range as they recover from the over-exploitation of the commercial sealing era (18-19th centuries) whereas the Australian sea lion population is decreasing (or stable but low) throughout its range and is considered vulnerable. Understanding the mechanisms which determine foraging efficiency in fur seals and sea lions will have implications for the management of these species, which are likely to experience increasing interactions with fisheries activities. The results of this research will assist in the development of policies to ensure the environmentally sustainable use of marine resources. Read moreRead less
The role of early life history on the survival of coral reef fishes - opening the Black Box. A fundamental unanswered question in marine ecology and fisheries management is - what influences the number of individuals that survive the larval phase to join a reef population? Theoretical studies show that small changes in the quality of offspring can lead to large changes in the numbers surviving the larval phase. What aspects of offspring quality determine who survives is largely unknown. We use ....The role of early life history on the survival of coral reef fishes - opening the Black Box. A fundamental unanswered question in marine ecology and fisheries management is - what influences the number of individuals that survive the larval phase to join a reef population? Theoretical studies show that small changes in the quality of offspring can lead to large changes in the numbers surviving the larval phase. What aspects of offspring quality determine who survives is largely unknown. We use a multidisciplinary approach to explore what influences the quality of offspring spawned by adults, and whether offspring traits prior to or at hatching determine the identity of individuals that survive to join the reproductive population.Read moreRead less
Ageing wild vertebrates from their DNA: an investigation using Humpback Whales as an example. The aim of this project is to estimate the age of individually identified humpback whales and the age structure of humpback whale populations using non-lethal, innovative molecular techniques. Populations of humpback whales in the Southern Hemisphere are slowly recovering from intensive whaling during the 20th century. This project is significant because it will provide the first comparative information ....Ageing wild vertebrates from their DNA: an investigation using Humpback Whales as an example. The aim of this project is to estimate the age of individually identified humpback whales and the age structure of humpback whale populations using non-lethal, innovative molecular techniques. Populations of humpback whales in the Southern Hemisphere are slowly recovering from intensive whaling during the 20th century. This project is significant because it will provide the first comparative information on the age structure of these populations, resulting in improved estimation of recovery and population dynamics of long-lived vertebrates. The results of this project will revolutionise research on ageing in whales and dolphins, providing an important alternative to lethal scientific whaling.Read moreRead less
Sequence to Sequence: Rigorous Statistical and Mathematical Analysis of Biological Sequence Data. Comparative genomics is fundamental for developing an understanding of genes and their function. For example, using statistical and computational techniques, it was recently demonstrated that 60% of genes are conserved between fly and human. When the human gene that confers susceptibility to Parkinson's disease was transferred into the fly it caused symptoms similar to those seen in humans. The futu ....Sequence to Sequence: Rigorous Statistical and Mathematical Analysis of Biological Sequence Data. Comparative genomics is fundamental for developing an understanding of genes and their function. For example, using statistical and computational techniques, it was recently demonstrated that 60% of genes are conserved between fly and human. When the human gene that confers susceptibility to Parkinson's disease was transferred into the fly it caused symptoms similar to those seen in humans. The future development of 'personalized medicine' will rely upon understanding the function of human genes, as will progress in the agricultural sector. Rigorous statistical analysis and development of appropriate bioinformatic methods are crucial to biological sequence analysis in comparative genomics.Read moreRead less
Statistical Advances in the Post-Genome Era. Biologically relevant statistical foundations for post-genome biology and biotechnology will be developed. Specific goals of the topics include the development of accurate and more efficient algorithms for sequence alignments, improved models to maximise the accuracy of analyses for gene expression data and superior statistical methods for identification of complex gene networks that predispose an organism to disease. The Project will make significant ....Statistical Advances in the Post-Genome Era. Biologically relevant statistical foundations for post-genome biology and biotechnology will be developed. Specific goals of the topics include the development of accurate and more efficient algorithms for sequence alignments, improved models to maximise the accuracy of analyses for gene expression data and superior statistical methods for identification of complex gene networks that predispose an organism to disease. The Project will make significant contributions to the new and evolving priority research area of Bioinformation Science (including bioinformatics). Outcomes will include novel techniques for analysis and mining of post-genome data, with applications to developments in Bio-medicine and Bio-agricultureRead moreRead less